Anser cygnoides (swan goose): 106046088
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Entry
106046088 CDS
T04896
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03020
RNA polymerase
acyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106046088 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
106046088 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
106046088 (POLR2B)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106046088 (POLR2B)
Enzymes [BR:
acyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106046088 (POLR2B)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106046088 (POLR2B)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106046088 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106046088
NCBI-ProteinID:
XP_013052378
UniProt:
A0A8B9IPH8
LinkDB
All DBs
Position
4:complement(68312800..68331705)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtacgatgaagacgacgatgaaatcaccccggac
ctgtggcaagaggcgtgctggattgtgattagctcttattttgatgaaaagggtttagtc
aggcaacagttggattcttttgacgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgctacaggagaagtggaagaa
ccgccccgctatctcctgaagtttgaacaaatctatctttccaaacctactcattgggaa
agagatggagcaccatcacctatgatgcccaatgaggccagactgagaaaccttacgtat
tcagcccccttgtatgtggatataactaaaacagttattaaagaaggggaagatcagtta
cagacgcaacatcagaaaacttttatagggaaaattcctattatgttacgatcaacatac
tgtttgttaaatggcttaactgaccgtgatctttgtgaactgaatgaatgccctcttgat
cctggtggctactttatcattaatggatcagaaaaggttctgatcgctcaagaaaaaatg
gctacaaacacagtatatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgcta
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaactttg
ccatatatcaaacaagaagtgcccatcataatcgtcttccgtgcactagggtttgtgtct
gacagggatattttagagcacataatttatgattttgaagatccagaaatgatggaaatg
gtcaaaccttctctggatgaagcatttgtcattcaggagcaaaacgttgctctgaacttc
attggatcgagaggtgcaaagccaggcgtcaccaaagaaaaaagaatcaagtatgctaaa
gaagtcttgcagaaagaaatgcttccgcatgttggtgtcagtgacttctgtgaaaccaag
aaggcctatttcctagggtatatggttcatcgattgttgctggcagcactgggaaggagg
gagcttgatgacagagatcattatggcaacaaaagactggatcttgctgggccactgtta
gctttcttgttcagaggaatgtttaagaacttgctgaaggaagtgagaatatatgcacag
aagtttattgacagagggaaagatttcaacttggaactggccattaaaacgagaattatt
tcagatggtttgaaatattcattagcaactggaaactggggtgatcagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgacctttgcatctacgctatcc
catctgagacgcctgaactctccaattggtagagacggtaaactggcaaagcccagacag
ttgcacaatacgctgtggggaatggtttgtcctgctgagactccagagggtcatgcagta
ggacttgtcaagaacttagcccttatggcttacatttctgtggggtctcagccatctccg
attttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
atagccgatgctactaagatcttcgttaatggctgctgggtaggaatacacaaagatcca
gagcagcttatgaatacgctaaggaagctccgtcgtcagatggatatcattgtatcagag
gtctcaatgattagggatattcgtgagcgagaaatccgcatttatactgatgcaggcaga
atttgccgaccacttttaattgtggaaaaacagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtacaacaattacagttggcaggatctcgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gatttgcaagaaaaaggcgttgcatattgttcaacatacacgcactgtgagattcaccca
tcaatgatcctgggagtatgtgcatctatcattcctttccctgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggctatgggagtttacattacaaacttc
catgttcgtatggatacgctggcacatgttctgtattatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgttttagagagttaccagcaggtatcaattcgattgta
gccattgcgtcgtacacaggatataaccaggaagactctgtcatcatgaaccgttctgct
gttgatagaggctttttcagatctgtgttttatcggtcctacaaagagcaagagtccaaa
aaaggatatgaccaagaggaagtttttgagaagcctacacgtgaaacttgccaaggtatg
agacatgcaatctatgacaaactcgatgatgatggcttaatagcacctggggtgcgtgtg
tctggggatgatgtcatcattggcaaaacagtaacgctaccagaaaacgaagatgaactg
gaaagcactaacagacgcttcacaaagagagactgtagcacttttctgcgaactagtgag
actggtattgtagatcaggtcatggtaacacttaaccaggaaggatacaagttctgcaag
attagggtacgttctgtaagaatcccacaaataggagataaatttgccagcaggcatggt
cagaaaggaacctgtggtatccagtaccggcaagaggatatgcccttcacttgtgaaggc
atcacacctgatataattatcaacccccatgccatcccttcccggatgaccattggtcac
ttgattgaatgtcttcaggggaaggtgtcggcaaacaagggagaaattggtgatgctaca
ccatttaatgatgctgtcaacgtgcagaagatttccaatcttttatcagattatggttat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcacag
atctttattggtcctacatattatcagcggttgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccaaatacttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgttttggagaaatggaacgagattgccaaattgctcatggagcagcc
cagttcttgagagagagattgtttgaagcttcagacccatatcaagtccatgtatgtaac
ctctgtgggattatggcaatcgcaaacaccaggactcacacctatgaatgccggggatgc
cgcaataaaacacagatatctttggttcgaatgccctacgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcacctcgtatgatgagtgtttag
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integrated database retrieval system
