Anser cygnoides (swan goose): 106046210
Help
Entry
106046210 CDS
T04896
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04137
Mitophagy - animal
acyg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106046210 (OPTN)
04137 Mitophagy - animal
106046210 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106046210 (OPTN)
Membrane trafficking [BR:
acyg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106046210 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106046210 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
106046210 (OPTN)
Xenophagy
Cargo receptors
106046210 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEMO
CC2-LZ
zf_C2H2_10
DUF6439
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
106046210
NCBI-ProteinID:
XP_047918447
UniProt:
A0A8B9ETS8
LinkDB
All DBs
Position
1:7160921..7180788
Genome browser
AA seq
556 aa
AA seq
DB search
MSSKVQSRPAENGEHPRSKMENGTDGAAAPTLSTYTPEEMVQQMKELITENNELKEAMKL
HNQAMKERYEELSIWREKQKEEREFYETKFKEAKQCLLAKCIENEQLQQQLQSLKEREEG
AEMEGCVAPEKEAKQLKSQVQRLQAEKADLLAIISELQVKLNISAEDSFVEIGMNEGEIN
RAAKENQDNSGEVPSNVAVYIRGKYADESKNLESEELTVSQLLCCLRNETQKREKLEKEL
QDHKERISKLENETSNCLEKGTQTDQEEESTEAVGSEVETLNTQVCALFKELQEAHAKLK
EAELIQKKLQEKCQVLERMNSAAASELEEKQQLIYTIKKLELQVESVQAEVKLEQAKTQE
EKTRYSNLQDAYNKILPELTEAMKTISEMKIKELDRVDKAVVEELNAKVLLAEQALAAKQ
LQMDEMKQIITKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLK
DQQNLEDLGRNSLAEMQNRHGARAPEREQSPRLVQRGTGSQEWPEQRNISMYSCPKCEEI
LPDLDTLQIHVMDCIN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggtgcagagccgtcctgctgaaaatggagagcatcccaggagcaaaatg
gaaaacgggacggacggtgcggctgcccccaccctcagcacatacacaccagaagagatg
gtacagcagatgaaagaactgatcactgagaacaacgagttaaaagaagccatgaagttg
cataaccaagctatgaaggagcgatatgaggaactttccatctggcgagagaagcagaaa
gaagaacgagaattttacgagacaaagtttaaagaagcaaagcagtgcctgctagccaag
tgcattgaaaatgaacagctacagcaacagcttcagagcttaaaggaaagagaagaagga
gctgaaatggagggctgcgtggctcctgagaaggaagcgaagcagctcaagtcccaggtg
cagcggctccaggctgagaaggcagatctactagccatcatttcagaactgcaggtcaag
ctgaacatctcagcagaggactctttcgtggagattgggatgaatgaaggagaaataaac
agagctgcaaaagaaaatcaagataatagtggtgaagtgcccagtaacgtcgctgtctac
atcaggggcaaatatgcagatgagtccaagaatttggaatcggaggagctaactgtaagc
cagctgctctgctgccttagaaatgaaactcagaaaagagaaaaacttgagaaggagctg
caggatcacaaagagagaatttcaaagctggagaatgaaacaagcaactgcctggagaaa
gggacacaaactgaccaggaagaagagagtacagaggctgttggcagtgaagtagaaacc
ctgaatactcaagtttgcgctctgtttaaagagcttcaggaggcccacgcgaagttaaaa
gaagcagaattgattcagaagaagcttcaagaaaagtgccaagtactggaaagaatgaac
tcagctgctgcatcagaattggaggagaagcagcagctaatatacaccatcaagaagctg
gagctgcaggtggagagcgtgcaggcagaggtcaagctagaacaagccaagacacaggaa
gaaaagacaagatacagtaacttgcaggatgcatacaacaaaattcttcctgaactcact
gaagcaatgaaaacaatcagtgaaatgaaaatcaaagagctggacagagtggataaagct
gtggtggaagaactgaatgcgaaggtgttgctggcagaacaagcccttgcagcaaagcag
ctccagatggatgaaatgaagcagataattacgaagcaagaggaggaccttgaaaccatg
gctgtgctgcgtgctcagatggaggtttattgttccgatttccatgctgagagggcagca
agagagaagatccatgaggagaaggagcagttggccgtccagctggcatacctgctaaaa
gaccagcaaaaccttgaagatcttggccgaaactctttggcggagatgcagaatcgccac
ggagccagggcaccagaacgggaacagtcacctcgccttgtccaaagaggaactggtagt
caagaatggccagagcagcggaatatctcaatgtattcatgtccaaaatgtgaagaaatt
ctacctgacttggacacactgcagattcacgttatggactgcattaattga
DBGET
integrated database retrieval system