Anser cygnoides domesticus (swan goose): 106046646
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Entry
106046646 CDS
T04896
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106046646 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106046646 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106046646 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106046646 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
acyg00536
]
106046646 (COL6A6)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106046646 (COL6A6)
Glycosaminoglycan binding proteins [BR:
acyg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106046646 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
106046646 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
DUF1194
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
106046646
NCBI-ProteinID:
XP_047933980
LinkDB
All DBs
Position
Unknown
AA seq
2542 aa
AA seq
DB search
MDNWKPLLVLLFVCTFCSMDAQQTACRKATLADVVFLVDTSISVAQENFQKVIKFLSSLV
SSLDIGHDAIQVGLAQYSDETYQVFLLNQYLSKTDVLEQIGNLPYKGGETYTGRALDFVS
TTYFNESAGSRAKVYVPQLMILITSGESSDEVELPAKKLRDRGISIYVVGVGVQNTSELQ
QIASKPFDKYLYSIDSFDDLPDLSTRLLKNFCFAIGSQIEAFAKQYADIIFLIDSAETMK
HSASEGVKSLISQIVRQLDVGINKYRIGLAQFNGVGQVEFLLNTHEKKEEVLDHIQRTIA
FTGDSSQDGIAVKFLQETFFTDSAGSRINEGTPQVVVVFTSSGSRKNIMEAAWMLEELGV
KIVTVDVRYFDRIETRVSYPFNATYHVYEAESFESVQQSIVTDVETSLQNLYELDQMAPA
VCSSATVADIVFLVDESSKVGSKNFQLIRAFLLKVVDALDIGPRNVRVGLVLYSDEPRLE
FTLNTFKDKLEILNYLKNLPYRGGQTYTGAAIEFLRNKVFTLEAGSRKKQGVQQIAVVIT
DGQSLDGYAKPASKLRRKGVTVYAVGIQNTSESRKLDKIATYPPGNHVTTLKYFLQLSNI
RWKIKKQLCNEIVKKTFVVSLQSQNLKKGCVDTEEADIYFLIDGSGSIHPSDFDDMKTFV
NETIRMFQVGANNVRIGVVQYASESRTEFVIGQYNQMVTLVEAIRNINQIGGGTRTGNAL
IYMKSLFQMASRENVPQILVVITDGQSEDKVKQAASELRQQGITIYAIGVKEADQQQLEE
IAETNDRVYFVNDFDSLKNIKDGIVQNICSTNVCKNVRADVVFLVDGSESVRPDEFQKVK
DFMQSFVNNINVGLDNVRIGVLQFSSKMREEFQLDRYNTTADMQRAIQKMKQIKSGTLTG
KALTLAAPYFDQPRGGRPELKQYLIVVTDGEAHDSVKKPARAIRKKGVTIFAIDMLHANN
SQLLEITGSQDKVFFENDINFIQKQILFEICNLQNLCKRAEVADIIFVVHGSSGVTDLQF
KNVHRLIEAVVNTSVVGVDKVQFGVVVYSSTPEAYFLLNSYASKSRIRKKIFNLKPLPGK
PFTARALNFARQRFGVNYGGRPSSLAVTRILVLITDEPTVPSDKANLPMAIKALKEDEIN
LIAVGISKANRAELKEISEDQERLFFAQNYDELGSIHKNLTQIVCEKSKPVCSEQVADLM
FLMDGSGSISNNDFSVMKTFMKEVLDSFVISRNNVHVGVVQYSEEPQKEFSLNEFYNDVI
IKERIDRIEQLKSSTYTGKALRFVHSLFQPVHGGRKKRGVSQNLIVITDGQSHDNVEDAA
VDLRSDGVHVFAVGVGLINSFDLLRIAGDAKRVFTVENFDALKTIKRTVVNELCEYKDIP
TQDCNMDLSIGIDISRHTRPASSLLLKQKLQTFLPKLLHQMKSRPSVCCKTGFPVNIRFK
FQVLAQAKKLIFESDFEDYNEGIIQKFLDAQATVDTYLNVDFLQAIQEKFFSATSAKVKV
LLVFSDGLDDALEDLRKAADSFRFKGLDALLLVGLDNTQNLTELREIEFGRGFENNEPLS
IEFADTARILQNSLDTVAERKCCDVFCKCLGEIGERGARGIPGSKGSAGYRGIPGHPGEE
GGVGGRGPIGFNGTRGDRGCTGARGLKGYRGYQGSQGEHGDGGLDGIDGEQGDNGPPGLS
GEKGSPGKRGRKGPRGESGERGEPGLRGDHGDPGINNNVPGPKGEKGNSAWQGDPGPHGL
QGEQGHDGPNGAEGRRGLPGVKGGQGDLGEAGYPGDPGFKGPQGPKGLQGIRGPPGPQGM
LGPPASPGPPGLPGSVGKLGARGAKGEPGDPGEKGPLGPTGQRGVRGMDGRDVHGPEGSK
GAKGQPGFIGYPGPEGEDGDPGIPGAKGPKGVRGRRGNAGIPGSLGDPGDKGPSGPMGAK
GPRGTILMEPCELVNFTRKNCPCSSDTGTCPAYPTEVVFAFDMSEDVTPSAFERMRNIVM
LLLKTIKISESNCPTGARVSIVSFNANTRYLIRFSEFQKSNLLLQAVQRIPLERSTGKRN
IGAAMRFVARNVFKRVRQGILTRKVAIFFANGPSQDDMVINTAVLELSALDITPVIIAFS
EVPNVKRAFSSDNTGRFQLFVWERQLDESLDSIIYCTLCFDKCKPSKHCEVPISLPLQMD
MDIAYIMDSSHSITSEDFQRAKDFVSDMVDRFDIASQTSESRGGIRVALVQQAPRGFLPD
RSKTPVALEFNLGTYTNKDLMKNHIQESVRQLEGPSAIASALQWTVENVFFKDPRQRKHR
VIFVIIGSKTSTWDREKLKDVSLRVKCQGFTVFTLALGNNVNDNELIELSSSPTDQHLLT
LGRVSTSEMAYAQRFSRAFLNLLQQKINTYPPPELQEECENLDRGDTRKQVSTTERMPFS
KTDETDYSGYLKDIETTESRLLEKVREISTEPVYTVPEMGYDSEEKEYFTEEDAEGEKPQ
EYRGAQEKKENLEATLETGADYNVYDACDLPQDSGECQNFDLKWYYNKDQKMCSRFWYGG
CGGNRNRFETQEECEFLCIKSF
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atggataactggaaacctcttctggttcttctctttgtatgcaccttctgctctatggat
gcacagcagactgcttgcagaaaagccacgttggcagatgttgtctttttagtggatact
tcaataagtgttgcccaggaaaactttcagaaagtgattaaattcctctcctcattggtc
tcaagtcttgacatcggccatgatgcaatccaagttgggctggcacaatacagtgatgaa
acttaccaagtgttcttgctgaatcagtatttatcgaaaactgatgttctggagcagatt
gggaatttaccgtataagggtggagaaacttacacagggagagctctggattttgtcagc
acaacgtatttcaatgaatctgctggtagcagagctaaggtttatgtcccacagttaatg
attcttatcacaagtggagaatccagtgatgaagtagaattgcctgccaagaaactgaga
gacagaggcatttccatttatgttgttggagttggtgtccagaatacatctgagcttcag
caaatagccagcaaaccttttgataaatatctgtatagcatcgatagtttcgatgacctt
ccagatctctccacaaggcttttgaaaaacttctgctttgcaattggaagccagattgaa
gcatttgcaaaacaatatgctgatattattttccttattgactccgctgagaccatgaag
cattcagcatctgagggagtaaaaagtttaatctcccaaatagtcagacagctagatgtt
gggattaacaagtataggattggcctagctcagtttaatggtgtagggcaggtggagttt
ttgctgaacactcatgaaaagaaagaagaggtccttgaccacattcagcgcaccattgca
ttcactggagactcatcgcaggatggaattgccgtgaagtttttgcaggaaacctttttt
acggatagtgctggaagccggatcaacgaaggcactccacaggttgtagtagtcttcacg
tcctctggatccagaaaaaatatcatggaagcagcctggatgttagaggagttgggggtg
aaaattgtcacagttgatgttagatactttgacaggatagaaacaagggtgagctacccc
tttaatgcgacttaccatgtttacgaagcagagagctttgagtctgtgcaacagagcatt
gttactgatgtggaaacctcactccagaatctttatgaactcgatcaaatggcgccagca
gtgtgttccagtgcaactgttgcagacattgtgtttcttgtggatgaatccagcaaagtt
gggtcaaaaaacttccagctgatcagggcatttctcttaaaagttgttgatgccctggat
attggtccaaggaatgtgagagttgggctagtgctgtacagtgatgaaccaagactagag
ttcaccctgaacacattcaaggataaactggaaatcctgaactacctaaagaatttacca
tatcgaggtggacaaacatacactggagcagccattgaatttctaaggaataaggttttt
actctagaggcaggcagcaggaagaaacaaggagtgcaacaaattgctgtggttatcact
gatggtcagtccttggatggttatgctaaaccagcatctaaactaagacgtaaaggtgtt
actgtctatgctgtgggcatccagaatacctcagagagcagaaagcttgataaaattgca
acatatcccccagggaatcatgtcaccaccctgaagtattttctacagctgtcaaatatc
agatggaaaataaagaaacagctttgtaatgagattgtgaaaaagacgtttgtagtctca
ttacaatcgcagaatctgaaaaaaggttgtgtggacacagaggaagctgacatttatttc
ttgattgacggctctggcagcatacatccaagtgatttcgacgacatgaaaacgtttgtg
aatgagactatcagaatgttccaagttggtgccaacaatgttcgtattggtgtggttcag
tatgcatctgagtcaaggacagaatttgtgattggccagtacaaccaaatggtgacgtta
gtagaggcaattaggaatattaatcaaataggtggaggtaccagaactggaaatgcgtta
atatatatgaaaagtctgttccaaatggcatctagggaaaatgttccacagatcctggta
gtgattacagatggtcaatctgaagataaggtgaagcaagcagcaagtgagctgaggcaa
caagggatcactatctatgccatcggtgtcaaggaagctgatcaacaacagttggaggaa
atagcagaaacaaatgatagagtgtattttgtgaatgactttgattccctgaaaaatatt
aaagatggaattgtgcaaaatatctgttcaacaaatgtctgtaaaaacgtgagagctgat
gttgttttccttgtggatggctcagaaagtgtccgtccagatgagtttcagaaggtgaag
gatttcatgcagtcctttgtgaacaacattaatgttgggcttgataatgttcgaattggc
gtgcttcagttcagctctaaaatgagagaagagttccagcttgacagatacaacactaca
gctgatatgcagagagccattcagaaaatgaagcagattaaatcaggaacactgactggg
aaagcactgacccttgctgccccttactttgatcaacctagaggaggacgtcctgaattg
aaacaatacctaatagtggtcaccgatggggaagcccacgattctgtaaaaaaaccagcc
agggccatacggaagaaaggcgtaactatatttgctatcgacatgctccatgcgaacaat
tcccagcttttggagattaccggcagtcaagacaaagtgttctttgagaatgacattaac
ttcatacaaaagcagattctctttgaaatttgtaatctacagaatttgtgcaagagagca
gaagttgctgatatcatctttgtagtgcatggatcatctggtgttacagacctgcagttc
aaaaatgtgcatcgtcttatagaagcagtagttaatacctcagtggttggggtggacaag
gttcagtttggtgttgtggtctatagctctacgccggaggcgtatttcttgttgaattca
tatgcctccaaatctcggattagaaaaaaaatattcaacttgaagcctctgccaggcaag
ccctttactgcaagagctttgaactttgcaaggcagagatttggtgtgaactatggtgga
cgtccatcgtcacttgctgtcactaggatccttgttcttattactgatgaaccaactgta
ccatcagataaagccaaccttcccatggccataaaagctttgaaggaagatgaaatcaac
ttaattgctgttggaataagcaaagcaaacagagcagaacttaaagaaatttctgaagat
caagaaagattattctttgcacagaactatgatgaactgggaagcatacataaaaacctt
actcaaatcgtgtgtgagaaatctaagccagtttgcagtgaacaagtagcagacctgatg
ttcttgatggatggatcaggaagcatatcaaacaatgacttttctgtcatgaagaccttc
atgaaggaagttttggacagttttgttatttctaggaacaacgtacatgttggggtagtc
caatacagcgaagaaccccagaaagaattttctcttaatgagttctataatgacgtcatc
ataaaggaacgcatcgacagaatcgaacaactgaaatcctctacatacactgggaaagcg
ctgaggtttgttcatagtctttttcagcctgtccacggaggccgcaagaagagaggagtt
tcacagaacctcattgtgattacagacgggcagtctcatgacaatgtggaggatgcagca
gtggatttgagaagcgatggggtacatgtctttgcagttggtgtagggcttataaattcc
tttgatctgcttcgaatagctggtgatgcaaagagagtgttcacagtggagaactttgat
gccctgaaaaccatcaagaggactgttgtcaatgagctctgtgaatacaaagacattcct
acccaggattgcaatatggacctttctataggaattgatatttcaaggcatacacggcca
gcatcttcactgcttctgaaacagaaattgcaaacattcctccccaaacttttacaccaa
atgaaatcgcggccaagtgtctgttgtaaaactggctttccagtcaacattaggttcaaa
tttcaagtattggcacaggccaaaaaattaatctttgagtctgattttgaggactataat
gaagggatcatccagaagttcttagatgcacaggccacagtggacacttacctgaatgtg
gacttcttacaggcaattcaggagaagttctttagtgcaacctctgctaaagtgaaggtt
ctgttagtgttttcagatggactggacgatgcactggaagatctcagaaaagcagccgat
tcttttcgcttcaaaggccttgatgcacttctattagttggtctggacaatacacagaat
ttgactgaacttcgagaaatagagtttggcagaggttttgaaaacaacgaacctctgagt
attgaatttgcggatactgcacgcatcttgcagaacagccttgatactgttgcagaaaga
aaatgctgtgatgttttttgtaaatgccttggagaaattggtgaacgtggtgcccgggga
attcctggaagtaagggaagtgcaggttacagaggaattcctggtcatcctggcgaggaa
ggtggggttgggggcagaggtccaattggtttcaatgggactcgaggagacaggggatgt
acaggtgccagaggccttaagggctacagaggttatcagggaagtcagggtgaacacggc
gatggtggacttgatggcattgatggagagcagggagacaatggacctcctgggctttcc
ggagagaaaggcagccctggaaaacggggcagaaaaggccccagaggagaatcaggtgaa
cgaggagaacctggtctaagaggggatcatggagatcctgggattaacaataacgttcct
ggtcctaagggtgaaaagggaaactcagcatggcagggagacccaggaccacatggactc
caaggagagcagggtcatgatggccctaatggagcagaaggtcgaagaggccttccaggt
gtaaagggtggacaaggagatctgggagaagcaggttacccaggagatcctggttttaaa
ggcccacagggcccaaaaggactacaagggatcagaggacctccaggaccacaaggcatg
ctaggccctccggctagtccgggtcccccaggtctacctggctctgttggaaagctaggt
gcaagaggagcaaagggtgaacctggtgatcctggagagaaaggccctctgggaccaact
ggacagagaggtgtacgaggcatggatggcagagacgtgcatggtcctgaagggagcaaa
ggagcaaagggacaacctggattcatagggtatcctggtccagagggagaagatggagac
ccaggtattccaggagctaaaggacccaaaggagttagaggtagaaggggtaatgctggc
ataccaggttccctgggagatccaggggacaaaggaccatcaggacctatgggtgccaag
ggaccaagaggcaccattttaatggaaccttgtgaacttgtgaattttacacgaaaaaac
tgcccttgctcttcagatacaggcacctgtccagcttatccgactgaggtggtgtttgcc
tttgatatgtccgaagatgttactccatctgcatttgaaagaatgagaaacattgttatg
ttattgctgaagaccattaagatcagcgaaagcaattgcccaacaggtgctcgtgtctcc
attgtttctttcaacgccaacacgcgttatctcatccgtttctcagaattccaaaaaagc
aacttgctgctccaagcagtccagagaataccgctggagagatccactggcaaacgtaat
attggggcagccatgagatttgttgcaagaaatgtcttcaaacgggttcgtcagggcatc
ctcacgagaaaagttgccatattttttgccaacggtccgtctcaggatgatatggttatc
aatacagctgtactggagttgagtgccttggatatcactccagtgattattgccttcagt
gaagtgccaaatgtcaaacgtgccttttcaagtgataatactggaagatttcaattattt
gtttgggaaagacaactggatgagagtttggacagcatcatatattgtacactttgcttt
gataaatgcaagcccagtaagcattgtgaagtgcccatttctctacctcttcagatggat
atggatatcgcttacattatggacagctctcacagcatcaccagtgaagactttcagaga
gccaaagactttgtgagcgacatggtagatcggtttgatattgcttcacagacaagtgaa
tcacgtggaggcatcagagtggcattggtacaacaggctcccaggggcttcctgcctgac
agaagcaaaactcctgtggccttggagtttaatctaggaacatacactaataaagatttg
atgaagaaccatatccaggagtctgttcgccaactggaagggccatcagccattgcttct
gcactacagtggacagttgaaaatgtattttttaaagatcccagacaaagaaaacacagg
gtcatatttgtaataattggaagcaaaacaagcacatgggacagagagaagctgaaagac
gtttcactcagagtcaagtgccaaggatttactgtattcactcttgcgcttggcaataat
gtaaatgacaatgagctgatagaactgtcaagctcccccacagatcagcacttactgaca
ttgggcagggtttcaacatctgagatggcatatgcgcagaggtttagccgggcatttcta
aatctgctacaacaaaaaattaacacatatcctcctcctgaacttcaagaagagtgtgaa
aacttagatcgaggtgacacacgaaagcaagtgtctaccactgaaaggatgcctttttcc
aaaactgatgaaactgattacagtggctatttaaaagacattgaaacaacggaaagtaga
ctcctggaaaaagttagagagattagcacagaacctgtatacacggttccagaaatggga
tatgattctgaggagaaggagtatttcacagaggaagatgctgaaggagaaaagccacaa
gagtatagaggagctcaggagaaaaaggaaaacctagaggcaacattggaaactggagct
gactacaatgtttatgatgcatgcgacctgcctcaagatagtggagaatgtcagaatttt
gatctgaagtggtactacaacaaagaccagaaaatgtgtagtcggttctggtatgggggc
tgtggaggcaacagaaacagatttgaaacacaagaggaatgtgaattcttgtgtataaag
tctttttag
DBGET
integrated database retrieval system
