Anser cygnoides (swan goose): 106046661
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Entry
106046661 CDS
T04896
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04621
NOD-like receptor signaling pathway
acyg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106046661 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106046661 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
acyg04054
]
106046661 (NOD1)
Pattern recognition receptors [BR:
acyg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106046661 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_22
AAA_16
FumaraseC_C
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
106046661
NCBI-ProteinID:
XP_013053223
LinkDB
All DBs
Position
2:45001854..45030076
Genome browser
AA seq
951 aa
AA seq
DB search
MEGQLCANLEISVEKPPGTSPPSFIALLKIYRELLVSKIRNTQCLIDNLINNEYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFIRVLQKVTDAYYELQPWLDEIGYEPSENI
CSRPVVNTDPVSRYCQKLRHELGRDSKFVMSYAQREEMLLEETYSNSIMEMVSFTNESLG
EVCQLEALFDDAVGLINEDGETIYVFGDAGIGKSILLQKIQSLWARKQLDIGAKFFFRFR
CRMFSCFKEDEAVCLKDLLFKYNCYPDQDPAEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEMCSPDEPIHPLVLLVSLLRGKLLKGSKKILTARTGTEIQRNIIRKKVLLRGFSSS
NLKEYTAMFFKDEGQRTLVLNQLEANPNLCSLCSVPLFCWIIFKCYEHFHSMYDSHELPD
CSVTLTDVFLLMVEVHLNRSLKTSLLKNNTRSQAEMFKARKETLLALGKIAYRGMGNSFF
IFEQEEVTAANISEEDLQLGFLRTVKGYTGFDSQSTYEFLHLTLQSFFTALFVVIEERVG
TKELLQFFNECSSTETAQPSCLHIPWLKKHLAGEDPFRNNEHFHFTNLFLCGLLSRSKQK
LFRHLVLPAVIKRKRKTLITYLGESMKSHLKGLTRSRLLNYNQIQVQPNFVWMLRCLYET
QSEKVGKLAAKRMHANYIKLTYCNAYSADCSAISFVVHHFQKRLALDLDNNNINDYGIKQ
LLPCFSKLAVIRLSVNQITDHGVRILYEELSKYKIVTFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPTL
TNVSLAFNGITSEGGKSIAEAMQHNNSVKIFWLTKNELDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactctgtgctaacttggagatttctgtggaaaaacctccaggaacaagc
cctccgtccttcattgctttgctgaagatataccgagagcttctggtcagtaaaatccga
aacacgcagtgtttgattgacaacttgattaacaatgagtacttctccaccgaggacgcc
gagattgttgttcaatttccaactcaagcagataaggttcgcaaaatcctagacttggtt
caaagcaagggagaagaagtttcagaatatttcatccgtgtcctacagaaagtcactgat
gcttactatgaacttcagccttggctggatgaaataggttacgagccttcagagaatatt
tgtagcagacctgtggtaaacacagatccagttagcaggtattgccagaaactcagacat
gagctgggacgagactccaagtttgttatgtcgtatgctcagagggaagagatgctgctt
gaagaaacttactctaacagtattatggagatggtcagtttcaccaatgagagcctaggt
gaagtgtgtcaattagaagccctttttgatgatgcagttgggctaattaatgaggatgga
gagactatttatgtcttcggcgatgcgggaattggaaaatctatcttactgcagaagata
caaagcctgtgggccagaaaacagttggatataggggccaaatttttcttccgtttccga
tgtagaatgtttagttgctttaaggaagatgaagccgtatgtttgaaagacttgctcttc
aaatataattgctacccagaccaggaccccgcagaggtgttccatcacatcttgcaattc
cctcatacagttcttttcacgtttgatggctttgatgagatctattccaactttgatctc
agtagtgttcctgagatgtgttcacccgatgaacccatccaccccctggtgctgctggta
agcctactcagaggaaagcttcttaagggatccaagaaaattcttacagcacggacggga
actgagatccaaagaaacatcattagaaagaaggtgttgctccgtggtttctccagcagt
aacctgaaggaatacactgccatgtttttcaaagatgaggggcaacgaacactggtattg
aaccagctggaagctaaccccaatctctgcagtttgtgctcagtgcctttattttgttgg
attatctttaaatgctacgaacacttccattccatgtatgacagccacgaacttccagac
tgttctgttacgttgacagatgtgtttctgctaatggttgaagtccatctgaaccggtct
ctgaaaacaagtttgctgaagaacaacaccaggagtcaagcagagatgttcaaagcaaga
aaggaaacccttctagccttgggtaaaattgcatacagagggatggggaactccttcttt
atcttcgagcaggaggaggtcacagcagcaaacatctctgaagaagatttgcaattgggt
tttctcaggacagttaaaggttatactggctttgacagtcagtccacttatgagttcttg
cacttaacccttcagtcttttttcacagctttgttcgtggttattgaagagagagtaggc
accaaggagttacttcagtttttcaatgaatgctcttccactgagactgcccagccttct
tgccttcacatcccttggttgaagaaacacctggcaggggaggatcctttccgaaacaac
gaacacttccattttaccaaccttttcctttgtggcctgctttccagatccaagcagaag
ctcttcaggcacttagttttgcctgcagtcattaagaggaagagaaagacactcatcaca
taccttggggagagcatgaaatcccacctgaagggcctcactcggtccaggctcctcaac
tacaatcagattcaggtccagccaaattttgtttggatgctgaggtgcctttatgagact
caaagcgagaaagtggggaagctggctgccaaacgcatgcacgccaattacatcaagctg
acatactgcaatgcctactctgctgactgcagtgccatttcctttgtcgtgcaccacttc
cagaagcgcctggctctggatttggacaacaacaacatcaatgactatggaataaaacag
ctgctgccctgtttcagcaaacttgccgtgatcaggctcagtgtaaatcaaatcacagat
catggagtaaggatattatatgaagaactctccaagtacaaaattgtgactttcttgggc
ttatacaacaatcaaatcactgatgttggagccaaatatgttgcgaaactcattgaagaa
tgctcaagccttgaatatgttaaaataggagcaaacaaaataactagcgaaggagggaag
tgcctcgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtggggtaat
caagttggagacgaaggcgcaaaggcgttcgcagaggccctgaggaaccaccccacgtta
acgaacgtgagtctcgcattcaatggcatcacgtcagagggaggcaaaagtattgctgaa
gccatgcagcacaacaactccgtgaaaatattctggttgacaaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcacttatgg
cttatccagaatcaaattacagccaaaggggtgaagtacctcagcgaagctctcaaggag
aacacggctattaaagaagtctgtttgaacgggaacctgataagccaagaagaagccaaa
gcttttgaaaatgaagagcggatcatttgcttctga
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