Anser cygnoides (swan goose): 106046852
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Entry
106046852 CDS
T04896
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04142
Lysosome
acyg04144
Endocytosis
acyg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106046852 (CLTC)
04142 Lysosome
106046852 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106046852 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106046852 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106046852 (CLTC)
Membrane trafficking [BR:
acyg04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106046852 (CLTC)
Exosome [BR:
acyg04147
]
Exosomal proteins
Proteins found in most exosomes
106046852 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
106046852
NCBI-ProteinID:
XP_066835507
LinkDB
All DBs
Position
18:9799472..9830836
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccatccgcttccaggagcacctccagctccaaaacctgggcatc
aacccagcaaacatcgggttcagcactctgacgatggagtctgacaaattcatctgtatc
agagagaaggtgggagaacaagcgcaagtggtcatcattgacatgaacgaccccagcaac
cccattcgaagaccgatttcagctgacagtgctatcatgaatcctgccagtaaagtcatt
gcattaaaagctgggaaaacacttcaaatattcaacattgaaatgaagagcaagatgaag
gctcatacaatgacagatgatgtcaccttctggaagtggatctctctgaatactgttgcc
cttgtaacggataacgcagtctaccactggagcatggagggggagtcccagcccgtgaaa
atgtttgatcgccattctagtcttgctggctgccagatcatcaactaccgtactgatgct
aagcagaagtggctgctgctgactggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattctgtagatagaaaagtgtcacaaccgattgaggggcatgcagctagc
ttcgcgcagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagttgcatatcattgaagttggtacaccaccgactgggaat
cagccgtttccaaagaaagcagtggatgtcttttttcctcctgaagcacaaaatgacttt
cctgttgcaatgcagatcagtgacaagcatgatgtggtgtttctgataacgaagtatggc
tatattcacttgtatgacctggaaacgggcacctgtatctacatgaacagaatcagtgga
gagaccatatttgttactgcacagcacgaagcaacagctggaattataggagtaaacaga
aagggacaagtgctgtcagtatgtgtggaagaagagaatattattccctacatcacaaat
gtgctccagaatcctgacctagctttacgaatggctgtccgcaacaacctggcaggagct
gaggaactctttgctagaaaattcaacgcactgtttgcacaagggaactattcggaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgtcgg
ttccagagtgttccagctcagccgggacagacttctcctttactccagtactttggtatt
ctgcttgatcaagggcagctgaataagtatgagtcgctggaactctgcagaccagtgctt
cagcagggacgcaaacagctcttggagaaatggttaaaagaagacaagctggagtgttca
gaggagctgggagatcttgtgaaatctgtagatcctacactagcacttagtgtctacctg
agagccaatgttccaaacaaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtacgctaagaaggttgggtatactccagactggattttcttgctgaggaat
gttatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtggatgtctttatggagtataatttaattcag
caatgtacagccttcttgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcgcctcaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgaccgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcgctggaacacttcacagacttgtatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggttagtgaactattttggctccttgtcggta
gaagactcgctggagtgtctgcgtgctatgttatctgctaatattcgtcagaacctgcag
atctgtgtccaggtagcttcaaaataccacgaacaactgtcaacacagtcgcttattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctctattgtaaac
ttcagccaggatccagatgtgcacttcaagtatattcaagctgcatgcaagacagggcaa
attaaagaagtagaaagaatctgcagggaaagcaactgctatgacccagaacgtgttaaa
aatttcctcaaggaagctaaactcactgaccagctaccgctcatcattgtgtgtgatcgc
tttgactttgtccacgacttggtgctgtacctgtacagaaataatctccaaaaatatatt
gagatctatgtacagaaggtgaatccaagccgcctgcctgttgttattgggggactgctt
gatgtggattgctctgaagatgtgatcaagaaccttatccttgttgtgagaggccaattt
tcaactgatgaacttgttgcagaggttgagaagagaaacaggctgaaattgcttctgccc
tggctggaagcaagaattcacgagggttgtgaggagcctgcaactcacaacgcgttggcc
aaaatatacattgatagcaacaacaacccagagagattcctgcgtgagaatccttactat
gatagccgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgtgtggct
tatgagcgtggacagtgcgatttggaactcatcaacgtgtgcaatgagaactcccttttc
aaaagcctttctcgttacttggttcgccgtaaagaccctgaactgtgggccagtgtgcta
ttggaaagcaacccttacagaagaccactgattgaccaggttgtacagactgcgttgtca
gagacccaggatcctgaggaagtgtctgtcactgtgaaggccttcatgactgcagatctt
cctaatgagcttattgaactgttggagaaaatagttcttgataactctgtgttcagtgag
cacaggaatctgcagaaccttctaattcttacagcaattaaggctgatcgcacgcgtgtc
atggaatacatcaatcgcctggataactatgatgctccagacatagccaatatagctatc
agtaatgagctctttgaggaggcgtttgccatcttcaggaagtttgatgtcaacacgtca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcatatgaatttgctgaa
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaaggaatg
gtaaaagaagcaattgactcgtatattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaaatatcttcagatggca
cgcaagaaggcccgggagtcatacgtggaaacagaattaatctttgctcttgctaaaaca
aaccgtctagcagagttagaggagtttatcaatggacccaacaatgcacatattcagcaa
gttggcgatcgctgttacgatgaaaagatgtatgaagcagctaagctgttgtataacaac
gtgtccaactttggccgtttagcctcaactttagttcacctaggtgaataccaggcggct
gtagatggtgctcggaaagcaaacagtactcgcacgtggaaagaggtctgctttgcttgt
gttgatggaaaagagttccgcctggcccagatgtgtggacttcatattgtagtgcatgcg
gatgagttggaagagctaatcaattattaccaggatcgcggctactttgaagagctgata
actatgttggaagcagcacttgggcttgagcgagcacacatgggaatgtttacggagcta
gcaattctttactccaagttcaaaccacagaagatgagggagcacttggaactgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaggcccatctctgggctgaa
ctggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaac
cacccaacagatgcttggaaagaaggacagttcaaagatatcattactaaggtggctaac
gtggagctgtattacaaggcagttcagttctatttggaatttaaacctctgttgcttaat
gatctgctgatggtattgtcccctcggcttgaccatactcgtgctgttactttcttcacc
aaggttaaacagttaccactggttaagccttacttgcgttctgttcaaaatcacaacaac
aaatcggtgaacgagtccctgaacaaccttttcattattgaagaagactaccaggcgctt
aggacttctatagatgcatatgacaactttgacaatatttctcttgctcaacgtttggag
aaacatgagctgatagagttccgaagaattgctgcctatctcttcaaaggaaacaatcgc
tggaaacagagtgtagagctctgtaagaaagacagactgtataaggatgcgatgcaatat
gcttcagaatccaaagacactgagctggcggaagaattgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctgttcacctgctatgatcttttaaggccggat
gttgtcttggaaacagcatggaggcacaacatcatggactttgccatgccatacttcatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggtcagccccagctaatgttgacagcaggacccagcgttgcagttcctccacaagca
ccttttggctatggctacactgcacctccgtacgggcaaccgcagcctggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
