Anser cygnoides (swan goose): 106047381
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Entry
106047381 CDS
T04896
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X2
KO
K16498
protocadherin delta 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106047381 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acyg01009
]
106047381 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106047381 (PCDH9)
Protein phosphatases and associated proteins [BR:
acyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106047381 (PCDH9)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106047381 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
106047381
NCBI-ProteinID:
XP_013054297
LinkDB
All DBs
Position
1:172281412..173004792
Genome browser
AA seq
1161 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPFSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NSKGLFRIDPVTGNITLEEKPNPSDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASHIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQPQDEFYDQ
ASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGSYQQPKS
PLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPL
ANLKSYKQASGSVESPNEHQL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctgtagctcaagaacttatttacactattagagaggagctgcctgaaaatgtccccata
ggaaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
accaccggagaaatctttacgacatctaacagaatagacagagaaaaactctgtgccggt
gcttcctatgcagaagaaaatgagtgcttctttgaacttgaagtggtgattctccccaat
gactttttcaggttgatcaaaataaaaataattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccataccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgatacaggtttcaatggtgtgcagcactacgag
ttgttgaatggacagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctatgtgatg
aaaatcaaagtggaggatggaggtaccccgcagaaatccagcacagctatcctgcaagtg
acagtaagtgatgtcaatgataacaggccagtttttaaagagagtcaagtagaggtccat
ataccagaaaatgcccctgtaggcacctcagtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcgaccaaa
agattttttgctttaaacaataccacagggctgatcacagttcagaggtccttagatcgg
gaagagactgctattcacaaagtgaccgtgctggctagtgatggtagctctacaccagct
cgggcaaccgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaggcagtttatgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgccgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctccttttttgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagaacaggaacgattcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtcttggatgaaaatgacaacagtcccaaatttactcataatcactttcaatttttt
gtatcggagaacctaccaaagtatagcactgtgggagtgatcacggtgactgatgcagat
gctggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccattctctggagttataaaatccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgtgaaggcagttgacgggggacaacctcctcgctcttctacagcaaaa
gtaactataaatgtcatggatgttaatgataacagtcctgttgtcatttacccgccttct
aatacttcttttaagttagtgccactctcagcaattccgggatcagtggtagcagaagtg
tttgctgtagatatcgacaccggaatgaatgccgaactgaagtacacaatagtaagtgga
aatagcaaaggtttgtttcggatcgatccagtgacaggtaatatcactctggaagaaaaa
ccaaatcctagtgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccttgcatactcttgtgcttgtatttttgtatgtgaatgatactgctggaaat
gcctctcatatttatgacttgatacgcaggacaatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaacgaggactatctcacgatcatgattgctattgtg
gcaggtgcaatggttgttatagtggtgatatttgtcacagttctcgttcgctgccggcat
gcatccagattcaaggctgcccagaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaagaaagaaaaggaaatctccgaagagttct
cttttgaacttcgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aatgggacaataagccttccagcggagctggaggagcaaagtataggaagatttgactgg
ggcactgcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccacgtgattcaggaactcccattggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagccgcaggacgaattctatgaccag
gcctcaccggacaagaggactgaagctgatggcaactctgaccccaactcggatgggcct
ctagggccacgaggattagctgaagctacagagatgtgcacgcaagaatgcctggttttg
ggtcattcagataactgttggatgcctcccagcttgggatcataccaacagccaaagtct
cctctctctacctttgcacctcagaaagaatgggttaagaaggacaaactagttaatgga
cacacattgaccaggacctggaaagaagatagcaacagaaaccagttcagtgaccgaaag
cagtatggttccagtgagggccacttcaacactggtaatcacatgactgacattcctctg
gccaatttgaagtcttataaacaggcctcgggatctgttgagagtccaaacgagcaccag
ctataa
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