KEGG   Anser cygnoides (swan goose): 106047712
Entry
106047712         CDS       T04896                                 
Symbol
CCNT1
Name
(RefSeq) cyclin-T1 isoform X1
  KO
K15188  cyclin T
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106047712 (CCNT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acyg03021]
    106047712 (CCNT1)
Transcription machinery [BR:acyg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     106047712 (CCNT1)
    Brd4/P-TEFb complex
     106047712 (CCNT1)
    7SK RNP complex
     106047712 (CCNT1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB UPF0253
Other DBs
NCBI-GeneID: 106047712
NCBI-ProteinID: XP_066841911
LinkDB
Position
32:1214716..1225269
AA seq 733 aa
MEASAGGGAGGAAGRRWYFSREQLERSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVS
QLTINTAIVYMHRFYMVQSFTQFHRNSVAPAALFLAAKVEEQPHKLEHVIKVAHACLHPQ
EPPPDTRSEAYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRASKDLAQTSY
FMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDGTVTLELLD
ELTHEFLQILEKTPNRLKRIRNWRASQAARKSKADDHSEDKSLSEQTILNMISRNNSSDM
NIAGLMSMSTSSTAGAGPSLPASTDSPREQSGAEASQPEHWLSQHPPPKLEAGQGHRTSE
SSSAAEHPPQQDGAAYQKQSGKNAPSAKVSLKEYRAKHAEELAAQKRQLENMEANVRSQY
AYAAQNLLVQQQREREVQQDSNPSPIILKIPIGSENPERPPGPEKSDKASALKLRLPVAG
GGGERPLPSKQEEIKMRIKVPSAVDRPGSLDESGAKSREHKEKHKGHSSNHHHHHHNHHS
HKHLHPQLAAGPSGVVNKRPGDSKHVGPPSAVPHKTYGLFGSSSRKRPLPEEAAAAGAAH
EHQPKVSKSSKGSGAQFPYPHLPGHGSEAGGLPLPPATKTRGPHGKSDKGPAGANGHNAS
QASDYQDTVNMLHSLLSAQGMQPTQPPAFDFHAYGELLNPPRAAAGSRAANTDRPRPPPL
PSEPPPPLPPLPK
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggaggcctcggcgggcggcggggccggcggcgcggcggggcggcgctggtacttcagc
cgcgagcagctggagcgcagcccctcgcgccgcgccggcctcgaccccgacaaggagctc
tcgtaccggcagcaggcggccaacctgctgcaggacatggggcagcgcctcaacgtctcg
cagctcaccatcaacacagccatcgtgtacatgcaccgcttctacatggtgcagtccttc
acccagttccacaggaactcggtggcaccggcggctctgttccttgcagccaaggtggag
gagcagccccataagctggagcatgtcatcaaggtagctcacgcctgcctgcatcctcag
gagcctcctccggacaccaggagcgaggcttacctgcaacaagcccaagacctggtcatt
ctagagagcataatactgcagaccctgggctttgagatcacgatcgaccacccccatacc
cacgtggtgaagtgcactcagctcgtgcgagccagcaaggacttggcgcaaacttcctat
ttcatggctaccaacagcctgcacctgaccaccttcagcctgcagtacacccctcccgtt
gtggcctgcgtctgtatccacctggcttgtaaatggtccaactgggagatcccagtctcc
acggacgggaagcactggtgggaatacgttgatggcactgtaactctggagctcttagat
gaactgactcatgaattcctgcagatcctcgagaaaactcccaaccggctcaaacgcatc
cggaactggcgggcctctcaggcagcccggaagtcgaaggccgacgaccacagcgaagac
aagagcctgtcggagcagaccatcctcaacatgatttcgaggaacaacagctcagacatg
aacatcgccggcctgatgagcatgtcgacgtcctcgacggccggcgcggggccgtccctg
ccggcctcgaccgattccccccgcgagcagagcggcgcggaggcgtcgcagccggagcac
tggctgtcccagcaccctccccccaagctggaagccggccagggccacaggactagcgaa
agctcctcggccgccgagcaccctccgcagcaagatggcgctgcttatcagaagcagagc
ggcaagaacgccccgtcggccaaggtgtcgctcaaggagtaccgcgccaagcacgccgag
gagctggcggcgcagaagcggcagctggagaacatggaggccaacgtgaggtcgcagtac
gcctacgccgcgcagaatctcctggtccagcagcagcgggagagggaggtccagcaggac
agcaacccctcgcccatcatcctgaaaatccccatcggctcggagaaccccgagcgccct
cccggccccgaaaagagtgacaaagcctcggctctgaagctgaggctcccggtggcgggt
ggaggcggcgagaggccgctcccctccaagcaggaggagatcaaaatgcgcatcaaggtg
ccgagcgccgtggacaggcccggctccctggacgagagcggcgccaagagccgggagcac
aaggagaagcacaagggccactcctccaaccaccaccaccaccaccacaaccatcactct
cacaaacacttgcacccccagctcgccgctggccccagcggcgtggtcaacaagcggccg
ggagactctaagcacgtcggcccgcccagcgccgtgccccacaaaacctacggcctcttc
ggctcttcctcccgcaagaggcccctgccggaggaggcggcggcggcgggcgcggcgcac
gagcaccagcccaaagtcagcaaaagctccaagggctccggggcgcagttcccctatcct
cacctcccgggccacggctcggaggccggcggcctccctttgcccccggctaccaaaacc
cggggtccccacggcaaatcggacaaggggcccgcgggggccaacgggcacaacgccagc
caggccagtgactaccaggatacggtcaacatgctgcactcgctgctgagcgcccagggc
atgcagcccacccagccccccgccttcgacttccacgcctacggcgagctcttgaacccc
ccccgggcagccgccggctcccgagccgccaacacagacagaccccggcccccgccgctg
ccctcagaaccgccccccccgctgcctcccctccccaaataa

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