Anser cygnoides (swan goose): 106047727
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Entry
106047727 CDS
T04896
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X6
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106047727 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acyg04040
]
106047727 (SCN8A)
Ion channels [BR:
acyg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106047727 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
FraC
Motif
Other DBs
NCBI-GeneID:
106047727
NCBI-ProteinID:
XP_047908816
LinkDB
All DBs
Position
32:complement(1372752..1433720)
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AA seq
1776 aa
AA seq
DB search
MMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCL
SVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPL
LCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRA
AGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQ
QEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKVSSKSAKERRNRRKKRKDKELS
EGEEKGDAEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSS
IFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRS
SRIFPNLRRNVKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSM
DQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKE
IVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKL
IAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNML
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPRWHMHDFFH
SFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADN
LAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMHTHFKQRGGDEVKPLDELYDKKVNC
IANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESD
FENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEG
CMQRCRCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQ
RKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLVANAL
GYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIM
GVNLFAGKYHYCFNETSEERFEIDIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYL
ALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVII
DNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAF
DIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFVIFFTCECVLKMFALRHYYFTIG
WNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTS
AGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAI
ILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKP
NTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYE
PITTTLRRKQEEVSAVVMQRAYRARLARRGFVSRRPVPTKLENGGTNREKKEGTPSTASL
PSYDSVTKPEKEKQQRAEEGRREKAKRQKDVRESKC
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatatgtcacagagtttgtggaccttgggaatgtctcagcattgagaactttc
agagttctccgagctttgaaaactatctctgttattccaggcttgaagaccattgtgggt
gccctaattcagtctgtgaagaagctgtcagatgtaatgatcttgacagtgttttgtctc
agtgtctttgctctgatcgggttgcagctgttcatgggcaatttgaggaacaagtgtgtg
atatggccaattaatgtgaatgagacgttcctggataacggctctaggggctttgactgg
gaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgatcctttg
ctctgtggtaacagctcagatgcaggtcaatgtccagagggctacacatgcatgaaagca
ggacggaacccgaactatggttacacaagctttgacactttcagctgggcttttctggct
ttgtttcgccttatgactcaggacttttgggaaaacttgtatcaattaaccttacgagca
gcagggaaaacctacatgatcttctttgtcttggtgatctttgtgggatcgttctatctg
gtaaatctaattttggctgtggtggctatggcttatgaagagcagaaccaggccacactg
gaggaggcagagcagaaagaggcagaatttaaggctatgttagaacaattgaaaaagcag
caggaagaagcacaggctgctgctatggtcacttcagcagggacagtctctgaggatgct
gtggaagatgatggtggggggaggatgtctcggagctcctcggagatttccaaagtcagt
tccaagagtgccaaggagcgtcgaaaccggaggaaaaaacgaaaggacaaagagctgtcg
gaaggagaggagaagggtgatgctgaaaaggtgttcaagtctgaatcagaggatggcatg
aggaggaaagcgttcagactacccgataacaggataggaaggaagttttccatcatgaac
cagtctctcctcagcatcccaggctccccttttctctcccggcacaatagcaagagcagc
atcttcagctacaaagggcgatttcgtgacccaggttcggagaatgagtttgctgatgac
gagcacagcacggtggaggagagcgaaggcaggagagactcccttttcatccccatccgt
ggccgtgaccgaaggagcagctacagcggctacagcggctacagccaaggcagccggtcc
tcgcggatttttcccaacctccgccgaaacgtgaagaggaacagcacggtggattgtaac
ggcgtggtgtccctcattggcggcccaccttccagcatgcctgggggacgccttctgcct
gagggtaccactgaaatagaaattaaaaagaaacctggtgggtctctcttggtctcgatg
gatcaggtgaatgcctcctatggaagaaaggatcgaaccaacagtgtaatgaccggcttg
acaaatacccttgttgaggagctggaagagtcccagaggaagtgtcccccttgctggtac
aaatttgccaacacgttcttgatctgggaatgccacccgtactggatcaagctgaaggag
atagtgaacttaattgtcatggatccttttgttgacctggccatcaccatttgtattgtg
ctgaacactctgttcatggcaatggagcaccatcctatgacccccgagtttgaacatgtg
ctctccgtaggaaatctggttttcactggaattttcacagcagaaatgttcctgaagctt
atcgccatggatccctactattatttccaagaaggctggaacatctttgatggatttatt
gtctccctcagtttaatggaactgggtctagcaaacgtggaaggactttccgtactgcga
tctttccgattgctgagagtcttcaaactggccaagtcttggcccactctgaatatgctg
ataaaaatcatcggtaactcggtgggtgctttggggaacctgaccttggtgctagccatc
atcgtgttcatctttgcggtggtgggcatgcagctcttcggcaaaagctacaaggagtgt
gtctgcaagatcaatccggagtgtgagctaccccgctggcacatgcacgatttcttccac
tccttccttattgtcttccgtgtgttgtgtggggaatggattgagaccatgtgggattgt
atggaggtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtcatcgga
aatttagtggtgctgaacctattcttggccttgctactgagctccttcagcgcagataac
ttggcagccacagatgatgatggggagatgaacaacctgcagatttctgtcattcgcatc
aagaagggcattgcctggaccaaggcaaaagtgcgtgaattcatgcacactcatttcaag
cagagaggaggagatgaggtcaaacccttggatgaattgtatgacaagaaggtgaactgc
attgctaaccacacaggggctgatatcaacagagacattgattatcagaagaatggcaat
ggcacaacaagtggaattgggagcagcgtggagaagtacataatagatgaagatcacatg
tccttcatcaataaccccaatctcactgtccgggtacctattgctgtaggagaatcagat
tttgaaaatctcaacacagaagatttcagcagtgatacagatccagatggcagcaaagag
aaactggatgataccagctcctctgaaggtagcaccattgatataaaacctgaggtggaa
gaagtccctgtggaggccccagaggagtatctggacccagatgcgtgtttcacagaaggt
tgcatgcagcgctgtagatgttgtcaggtcaatattgaggaagggctgggaaagtcttgg
tggaccttgaggaagacgtgttttctgattgtggaacataactggtttgagactttcatc
atctttatgatcctactgagcagtggtgctctggcttttgaggatatttacatagaacag
aggaaaaccatccggaccatcctggagtatgcggacaaggtcttcacttacattttcatc
ctggagatgttgctgaaatggtgcgcctacggattcgtcaagttcttcactaatgcctgg
tgctggctggatttcctcattgtggctgtctctttagtcagccttgtagctaatgccctg
ggctactcggaactaggtgccataaagtcccttaggacactaagagctttgaggccttta
agagcgttgtcccgatttgaggggatgagggtggttgtcaatgccttggttggcgctatc
ccttccattatgaatgtgttgttggtctgccttatcttctggctgattttcagcattatg
ggggttaacctgtttgccgggaaatatcattactgctttaatgaaacatccgaggagcgc
tttgaaatagatattgttaacaacaagacagactgcgaagccctgatgccacccaactcc
actgagattcgatggaagaatgtgaaaattaactttgacaacgttggggcaggatacctg
gctctcctgcaagttgctactttcaagggctggatggacatcatgtacgcagcagtagat
tccagaaagcaagaagagcaacccaagtacgaggacaacatttacatgtacatatatttt
gttatcttcatcatcttcggctcctttttcaccctgaatttgttcattggtgtcatcatt
gacaacttcaatcaacaaaagaaaaagtttggaggtcaagatattttcatgacagaagaa
caaaagaagtactataatgccatgaaaaaactgggctcaaagaagcctcaaaagcctatt
ccccgacctctgaaccgtattcagggagctgtctttgactttgtcactcagcaagctttt
gatatagtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggagacagac
acacaaagcaagcagatggaggacatcctttactggatcaacctggtgtttgtcatcttc
ttcacctgtgagtgtgtgctgaagatgttcgccttgcggcactattatttcaccatcggg
tggaacatttttgacttcgtggttgtgattctgtccattgtgggaatgttcctggctgaa
atcattgagaagtattttgtatcacccacgctcttccgagtcatccgactggctcgtatt
ggacgtatcctgcgtttgatcaaaggagccaaaggaatccgcaccttgctttttgcctta
atgatgtctttgcctgccttgttcaacatcggcctcttgctgttcttggtcatgttcatc
ttctccatcttcggcatgtcaaactttgcctacgtcaagcatgaggccggcatagatgat
atgttcaacttcgagacctttggcaacagcatgatctgcttgttccagatcactacatcg
gctggctgggatggcctgctgctgccaatcctaaaccggcctccagactgcgatctagac
aaggagcatcccgggagtggttttaagggggactgtgggaacccttcagtgggcattttt
ttctttgtgagttacatcatcatctccttcctgatcgtggtcaacatgtacattgccatc
atcctggagaacttcagtgtggcgacagaggagagtgcggatccgctgagtgaggatgac
ttcgaaactttctatgagatttgggagaagttcgatcccgacgccacgcagttcatagag
tacagcaagctcgcggactttgctgatgctttggaacatcctctccgggtcccaaaaccc
aacaccattgaactcattgccatggacctgcctatggtaagtggagacaggatccactgt
ttagacatcctgtttgccttcaccaaacgtgtcctgggggacagtggagagctggatata
ctgaggcaacagatggaggaaagatttgtggcatccaacccttccaaagtgtcttatgag
cccatcacaactacgctgcggcgtaagcaggaagaagtctcagcagtggttatgcagagg
gcttacagggctcgtttagccagacgggggtttgttagccgaaggcctgtccccacaaaa
ctggaaaacggaggaacaaacagggagaaaaaagaaggcaccccatccacggcctctctc
ccatcatatgacagtgtgactaaacctgagaaggagaaacaacaacgggcagaggaagga
agacgagaaaaggcgaaaagacaaaaagatgtcagggaatccaagtgttga
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integrated database retrieval system
