Anser cygnoides (swan goose): 106048955
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Entry
106048955 CDS
T04896
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106048955 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106048955 (SMG5)
03032 DNA replication proteins [BR:
acyg03032
]
106048955 (SMG5)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106048955 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
106048955 (SMG5)
DNA replication proteins [BR:
acyg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106048955 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
106048955
NCBI-ProteinID:
XP_066842036
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All DBs
Position
33:1415123..1443234
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AA seq
1049 aa
AA seq
DB search
MSQGGGAGSESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMV
IICFMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQNDGTD
DQEPREPLNSIEKEAEAELANHQPKEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLS
EGFDSDSSQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDDPGDE
GSSRGKSGPKEALKNCVDGSGLGDSKIPSISKTETPDSAVNGPVSLSTNDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPNSEPAVLKDGLDNKPCVNGDLEKPSLAEQDDISDSE
ESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLDLCNEVKDMLSGAELPDLHTNLLLPEDVALRNLPPLKNAHKRF
NFEQDRPIFSAVEESVVRICCIRSFGHFITRLQGSILQFNSELGIFISIAQSEQDNLLHQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQH
LAVVKQLATSGRFIIIIPRIVIDGLDFLKKDNAGARDSIRYLEAEFKKGNRYIRCQKDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGNGEDDTTGMVTIITGFQLEDPSTLSAP
MQSAIQAATSASVEIKNVLEFYKQWKEMG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcggcggggccggcagcgagagcggcgagcccgaggccaaggtgctgcac
accaagcggctgtaccgagcagtggtagaggctgttcatcgactggatctcatccttggt
aataaggcagcgtatcaggaagtgttcaagccagagaacatcagcctgaggaacaagctg
cgggagctgtgtgtgaagctgatgttcttgcatccagtggattatggaagaaaagcagaa
gaactgctctggagaaaagtttactatgaagttatccagctcattaaaacaaataaaaag
cacattcacagccgcagcactctggagtgtgcgtaccggactcacttagttgctggcata
ggattttaccagcaccttctcctctacatccagtctcactatcagctggagctgcagtgc
tgtatcgactggacgcatgtcacggaccctctaataggctgcaagaaacccgtgtctgcg
tcggagaaggagatggagtgggcacagatggcatgtcacagatgtctggtttatctcgga
gatctagctcgctatcagaacgaactggcaggagtggacacagagctgctggctgagcgg
ttttactatcaagccctttctgttgcaccgcaaattggcatgccttttaatcagctgggg
acattggctgggagcaaatactacaacgtggaagccacctattgctatttacgctgtatc
cagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcgtctgtatgacaaagca
gccaaaatgtatcaccagctgaagaaatgtgaaaccaggaagttgtctccaagcaagaaa
cggtgcaaagacattaagaggttgctggtgagctttatgtacctgcagagccttttgcaa
ccaaagagcagctctctggattctgagctgacatcactctgccagtctgtactggaggat
ttcaatctgtgcttgttctacctgccttctcctcctaatctgagctcaaccagcgaagat
gaagaagagtatgagagtggctactccttccttcccgatctcctgatcttccgcatggtg
atcatctgctttatgagtgttcacagcctcaagagggcaggttcgaagcagtacagcgca
gccattgctttcacgctggccctcttctctcacctgatcaatcacgtcaatattcgcctg
caggcagagctagaagaaggggaaaatccagtcccagcctttcagaatgatggcacagat
gaccaggagccacgggagcctttgaactcgattgagaaagaagccgaagctgagttggcc
aatcatcagcccaaagaggaacaacggaagaatgactgcaagaaaagcaagaaatactct
cgcctctcctgtttgcgtcgccgtcgccacccccagaaggtggatgagagtgacctgagc
gagggctttgactctgactccagccagggctctacaaagggcagcgatggctcagaaagt
ggctcagagaagagtgacgaggaagcagaagctgcttttgatgtggagacggactctgac
atgaacagccaagaatctcggtctgacttggaggacatggaagatgatccgggtgatgag
ggaagcagccgaggcaaaagtgggcccaaagaggccttaaaaaactgtgtagatggcagt
gggcttggggactctaagatcccaagcatctctaaaactgagaccccagattcagcagtg
aatggacccgtttccctgagcactaacgacgcgagcatagccagtaatctccaagcgatg
tccacccagctgtttcagaccaaacgctgctttcgcttggctcccactttcagcaacatc
cttctgaaaccaaacagcgagccagctgtcttaaaggatggactagacaacaagccgtgc
gtcaatggagatctggagaaacccagcttggcagagcaagatgacatatccgactctgag
gaaagcatttcaagtaacaaatcctgcaggaacgaacgatcccttcaggagaagctagag
atcgtgaccaacgaggggctgcttctcactgtcaaggtgttcctggactggctgaggaca
aacacagacctcatcatcatgtgtgctcagagctctcagagcctgtggaacaggctgtct
gtgctcctgaaccttctgccttctgctgcagacctgcaggaatcaggactggacctttgt
aatgaagtcaaggacatgctgagcggcgctgagctgccagacctgcacaccaacttgctg
ctcccagaagatgtggccctgcgaaatctgccccctctgaaaaatgcacacaagaggttt
aactttgagcaggaccgaccaattttctcagcagtggaggagtctgttgttcggatttgc
tgcattcggagctttggccacttcattacccgcttgcagggcagcatcctgcagttcaac
tcagagcttgggatcttcatcagcatagcacagtcagagcaagacaacttgctgcaccag
gcccaagcccagtttcacatggctgcagaggaagctcgtcggaacaggctgatgagagat
atggctcagcttcgactgcagctggaggtttctcagctggaggggagtctccagcagccc
aaagcacagtcagccatgtctccttaccttgtcccggacacccaggccctctgccagcac
ctggctgttgtcaagcagttggccaccagcgggaggttcataatcatcatccctcgaata
gtgatcgatggcttagacttcctgaaaaaggataacgcaggtgctcgagacagcatccgg
tatctggaggcagaatttaaaaagggaaacagatacattcgttgccagaaagatgtcggg
aagagctttgagaggcataaattgaagagacaagatttagacgcctggaatctctataaa
atactggacagctgcaaacagctgacagtgtcccaagggaacggagaggatgacaccacg
ggaatggtcaccatcatcacaggctttcagctggaagacccaagcacgctctcggcaccc
atgcagtctgccatccaggcagccaccagtgccagcgtggaaataaaaaacgttctggag
ttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
