Anser cygnoides (swan goose): 106049386
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Entry
106049386 CDS
T04896
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03022
Basal transcription factors
acyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106049386
09124 Replication and repair
03420 Nucleotide excision repair
106049386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
106049386
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106049386
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106049386
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106049386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
106049386
NCBI-ProteinID:
XP_013057137
UniProt:
A0A8B9DN64
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Position
Z:complement(17969286..17982585)
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AA seq
411 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKSKRAEKMTEL
SGNSKKHIIALKKAVDMNCHGEPSLYNSLNLAMQTLKHMPGHTSREVLVVFSSLTTCDPT
NIYDLVKCLKAVKIRVSVISLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKYSE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYQGERYCQGCHGEIKDQNVYIC
KVCQNAFCVECDMFVHDSLHCCPGCIHEHPAPPWLSVRCLRTRKAWMITEG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagcctgaaaggaccaagcgctgggaaggaggctacgagagaacatgggag
atcctcaaggaggacgaatcgggatcgctgaaagcgaccatcgaggacattctgttcaag
gcaaagaggaaaagactctacgaacaccatggacaagttcgactgggaatgatgcgtcac
ctttatgtggttgttgatggatcaaggactatggaggaccaggatttaaaaccaaacaga
cttacctgcactttgaagttactggaatattttgttgaagagtactttgaccaaaatcct
attagtcagatgggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaactcaaaaaagcacataattgctctgaagaaagcagtggatatgaactgccat
ggagaaccgtctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcttcagcagtctgacaacatgtgatccaacc
aacatctatgatctagttaagtgtttaaaagcagttaagatcagagtgtctgtcatcagt
ctaagtgctgaagttcgagtttgtacagtacttgcccgggaaactggtggaacataccat
gttattttagatgaaagtcattataaggaactgctaatgcatcatgttagtcctccacct
gccagttcaagttccgagtgctcccttattcgaatgggttttcctcagcacactattgct
tccctctctgatcaagatgcaaagccatccttcagcatggcgcaattggaaaacaacagt
gagccaggtcttacgctgggtgggtacttctgtccccagtgcagagcaaaatactctgaa
cttcctgtggagtgcaaaatctgtggtcttacattagtgtctgcacctcatctagctcga
tcttaccatcacttgttccctttggatgcctttcaggaaattccactggaagaatatcag
ggagaacggtattgtcaaggctgccatggagaaatcaaagatcaaaatgtttatatatgt
aaagtatgccagaatgcattttgcgtggagtgcgacatgtttgttcatgattctctgcac
tgctgtcctggctgtattcatgagcaccctgctccgccttggctttcagtgaggtgcctc
agaacaagaaaggcctggatgattacagaaggatga
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