Anser cygnoides (swan goose): 106049421
Help
Entry
106049421 CDS
T04896
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
106049421 (SUPT6H)
03036 Chromosome and associated proteins [BR:
acyg03036
]
106049421 (SUPT6H)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106049421 (SUPT6H)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
106049421 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
106049421
NCBI-ProteinID:
XP_047924120
UniProt:
A0A8B9ET00
LinkDB
All DBs
Position
18:7934504..7963224
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKNAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQAASSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDSLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
DEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLVDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagcgaggcagaggagtcggaggaggagtacaaccaggacggg
gaggtcgttcccagagtaaccaagaaatttgtagaggaagatgaggacgatgaggaagag
gaggaggaaaatctggatgatcaagatgagcaagggaacctgaaaggattcattaacgat
gatgacgatgaggaggaggaagaggaggaagaagccagtgactctggcgactctgaagac
gacgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggacgacgatttc
gacctcatcgaagagaacctgggcgttaaagtcaaacggcaaaaattcaggcgcgtgcgg
aaaatgtccgatgatgaggatgatgaagaggaggactacgggaaggaagagcatgagaag
gaagccattgctgaagaaatctttcaggatggtgaaggcgaggagggaggggaagctgtt
gaagctcctgttgctccaccagaagaagaggaggaggaggaggaagatgaatctgacatc
gatgacttcatcgtggatgacgacggacaacctctgaagaagcccaaatggagaaagaag
ctccctggatacactgatgctgccttgcaggaagcccaggaaatcttcggtgtggacttc
gactatgatgagtttgagaagtacaacgagtacgatgaagagatggaggaggaatatgaa
tacgaggatgaagaggctgaaggggagacccgtgtccgacccaaaaagactgccaagaag
cgcgtcagtcgccgtagcatctttgagatgtacgagcccagtgagctggagagcagtcac
ctaacagaccaggacaacgagatacgcatgacagacatgcctgagaggttccagttgcga
tccatcccagtaaagaatgctgaagatgacgagctggaggaagaagctgactggatttac
aggaatgcatttgcaacacccaccatctccttgcaggaaagttctgactaccttgatcgt
ggacaagccgccagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcaacactttgaggtcccattcatcgccttctacagaaag
gagtacgtagagccagagctgcacatcaacgacctgtggagagtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcaa
gcctaccagtatgagcaaatatctgctgacccagacaagcctttggctgatggaataagg
gcccttgatactactgacatggagaggctgaaggatgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gcaaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaagaaggt
gaaggagaggatgctgaagatgatgagcagaaagggcctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggacagcctggctaaaaagtttggt
ctgacacccgagcagttcggagagaatctccgagacagttaccagcggcacgagacagag
cagttccctgcagagcccctggagctggccaaggactacgtgtgtagtcagttcccaagt
ccagaagctgtgctggaaggagcccggtacatggtggctttgcagatagccagagagcct
ttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaaggggaagaaggatatcgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcggag
gatgaggcgctgctgactatagacatcagcattgacatgaaaggagtggagggttacggt
agcgaccagacatactttgaggaaatcaaacagttctactatcgggatgagttcagccac
caggtgcaggagtggaatcggcagcgtacaatggccattgagcggtccctcaaccagttc
ctctacgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaggagtat
gtcctcaaggcttgcagccgcaagctgtacaactggctaaaagtagcttcataccgtcct
gatcagcaagtggaggaagacgatgatttcatggacgaaaaccaagggaaggggattcgg
gtgctaggcattgccttctcctcagccagggaccaccccgtgttctgcgcccttgttaat
ggagagggcgaggttacagacttcctccgattgccacatttcacaaagagaaggaatgcc
tggcgtgaggaagagagagaaaagaaggcacaagatattgaaaccttgaaaaaatttctt
ttgaacaagaagcctcacgtggtgacaatcgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagagaattgttcatgagctggatcaggggcagcagctgtcctctata
ggagtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgag
aatgagttccgggattacccacctctgctgcgtcaagcagtctcccttgctcgtcgcatt
caggatcctctcatagagtttgcccaggtctgcagctctgatgaggatattctctgcctg
aaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgccctctactgc
gaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggcaattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacagaacaacacacgcctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacacagcg
tcgctgggcgatagtactgattcctacatcgaagtcctagatggttccagagtccatccc
gaaacctacgaatgggcaagaaaaatggcagtagatgccttagaatatgatgagtcagct
gaagatgctaatcctgcaggagctctagaggagatcttagaaaaccccgagcgactgaaa
gacctggatcttgatgcctttgctgaagaactggaaagacagggctacggcgacaagcac
atcactttgtatgacattcgagctgaactgagctgcaggtacaaggacctgagaacacca
taccgttctccaaacacagaagaggtcttcaacatgctgaccaaagaaactccagagact
ttttatataggtaaaatgatcatctgcaacgtgaccgggatagcccacaggcgaccgcaa
ggagaaagctacgaccaggcaatacggaacgacgaaactggcctttggcagtgtcctttc
tgtcagcaggataactttccagagctcagtgaggtttggaatcactttgacagcggttcc
tgcccaggtcaggccattggagtgaagacacgtctggataatggcgttgctggcttcatc
ccaacaaaatttcttagtgataaggtggtcaaacggccagaagaaagggtgaaggtggga
atgactgttcactgcaggattatgaagatcgacattgagaagttcagtgcagatctgacc
tgcaggacttctgacttggtggataagaacaacgagtggaaactgcctaaagacacctac
tatgactttgactctgaggcagcagatcacaaacaggaagaagacctgaaaagaaagcag
cagcgaacaacgtacatcaagagagtaattgctcacccgtcattccacaacattagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggacgtgattattcggccaagc
agcaaaggggagaaccaccttactgtcacctggaaggtgaacgatgggatttaccagcac
gtcgatgtccgagaagagggcaaggagaacgctttcagtctgggctccacgctttggatt
aacacagaggagtttgaagacctggatgaaattgtcgctcgctatgtccagcctatggct
tcttttgccagagacctgttgaatcacaaatactatcaggattgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacatttattccctac
tttatcagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggc
aaaccaaggatagagtatgtgacagtcacaccagaaggattccgctaccggggccagatc
ttccctaccgtgaacggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattacccccagcagtagcagtcggaccaggactccagcctccattaacgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaacgccctcccgcagaacatgacc
tcccagatgttcagtgccatcgctgccgtgacgggccaggggcagaacccaaatgccacc
cctgcacagtgggcatccagtcagtatggctacgggggcagcggaggtggcagcagcgcg
taccatgtcttcacgactccagcacagcaaccggtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgatcacgaccccccagtaccagctgcaggccaac
accacaccccagtccacccagtcccagacacagtcgcagccatcgtccagctccaggcag
aggcagcagccaaagaccaacagccatgctgcgatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgaacggaggaaacagaagcagaggctgactcctcgcccg
tcccccagccccatgatcgagagcacgcccatgtccatcgccggggacgccacgccgctg
ctcgacgagatggaccgatag
DBGET
integrated database retrieval system
