Anser cygnoides (swan goose): 106049682
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Entry
106049682 CDS
T04896
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03013
Nucleocytoplasmic transport
acyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106049682 (CASC3)
03015 mRNA surveillance pathway
106049682 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106049682 (CASC3)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106049682 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
106049682
NCBI-ProteinID:
XP_066837674
LinkDB
All DBs
Position
22:complement(7670118..7681725)
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AA seq
724 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAARSRSRSGSGSRSGSASPRPPHRQPRGAA
GALGAGPRGRGAESAAGGAAKSEPQSECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEE
SAKVELKQDSNDSCESAAKAEKGDEKPDAKGAVTGERQSGDGQESTEPVENKVGKKAPKH
LDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQA
PKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSGERPSKPPRHQGAES
ASAPPRTFTSRSSAGTGRMPPPRNYPRMGGYKETRPGYRASEASVPHLSRNGEQAKQEAG
YRAKRAEQTPPRAKSPELEAAHVHGSPGKEEVALENQAPSADVAQPPPDRPVEKKSYSRA
RRTRAKAGDAGKAADEAPASEGLAPVPPKPAQAEASPPPAKSSSWESPVEPGLDGLEQEM
TQMNLAEQSWAPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQR
QRPPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLH
PHQTPAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPP
PPHLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEQDSKSEKSKE
RSNT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcgccgactcggccgccagcgccgcccgctcccggtcccgctccggatcc
ggctcccggtccggctcagcctcgcctcggcctccccaccgccagccccggggcgccgcc
ggggccctcggcgccgggccgcggggccgtggggccgagagcgccgccgggggggcggcc
aagagcgagccgcagtccgagtgtgaaagcgaggacggcatcgaaggagatgccgtgctc
tcggattacgaaagcgcagaagactcggaggcggaggaagaggattacagcgaggaggaa
agcgcgaaggtggaattgaagcaggatagcaacgattcctgcgagtccgcagcgaaagca
gagaaaggggacgagaaacccgacgccaaaggtgctgtaaccggtgagaggcaaagcggg
gacgggcaggagagcaccgagcccgttgagaataaggttgggaaaaaagcccccaagcac
ctggacgatgacgaggaccgcaagaacccggcttacatcccacgcaaagggctcttcttc
gagcacgacctgcgagggcagacgcaggaggaggaggtcaggcccaagggtcggcagcgg
aagctgtggaaggacgagggccgctgggagcacgacaagttccgcgaggacgagcaggcc
cccaagaccaggcaggagctgatcgcgctctacggctacgacatcaggtcggctcacaac
cccgacgacatcaagccgaggaggatgcgcaaaccccggttcgggagccctcctcagcga
gaccccaactggtccggcgagaggccgagcaagcccccgaggcaccaaggcgcagagagc
gcttcggctccgccgcgaaccttcaccagcaggagctctgcgggaacggggaggatgccc
ccacccaggaactacccgaggatggggggctacaaagagacccgtccgggctaccgagcc
tcggaagccagcgtgccgcacctctctcgaaacggcgagcaggcgaagcaggaggccggc
taccgagcgaagcgcgccgagcagaccccgccgagggccaagtcccccgagctggaagcg
gcgcacgtccacggcagccccgggaaggaggaggttgctctggaaaaccaggccccgagc
gccgacgtcgcgcagccgccgccagacagacccgtcgagaagaagtcttactcccgggcg
aggaggaccagagccaaagccggggacgcggggaaggcggcggatgaagcgcccgcttcg
gaagggctggctcccgtgcccccgaaacctgcgcaagccgaggcgtcccccccgccagcc
aagagcagcagctgggagtcgccggtggaacccggcttggatggactggagcaagagatg
acgcaaatgaacctcgcggagcagagctgggctccggggcagtcgcagttcatccagccc
cgggagctgaggggcattcctaaccatatgcacgtgggaacggggccaccgccgcagttt
aacaggatggaggaaatggcggtgcaggggggccgcgtgaagcgctactcgtcgcagcgg
cagagaccgccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcac
tactatgacccactacaattccagggaccaatctacacccacagcgagaacccggccccg
ctgccgccccaggggatgattgtgcagccagaaatgcatctccctcatccaggtttacac
ccccaccagacgccggccccgatggcaaaccccggcctttaccctccaccggtctccatg
cctccgggccagcccccgccgcagcagctgcttgcgccgacttacttctccccgcctgga
gtcatgaattttgggaaccccggctacccctaccccccgggagcgctgcccccgccgccc
cctcctcacctctattccaacacgcaggcgcagtcccaggtgtacggcggggtcacgtac
tacaacactgtccagcagcaagtgcagcccaaaccttcgccgccgcgaaggacatcccag
ccggtcaccatcaagccgccgccccccgagcaggacagcaaaagtgaaaaatcaaaggag
aggagcaacacgtag
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