Anser cygnoides (swan goose): 106049822
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Entry
106049822 CDS
T04896
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106049822 (VPS13A)
Membrane trafficking [BR:
acyg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106049822 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
106049822
NCBI-ProteinID:
XP_066845187
LinkDB
All DBs
Position
Z:complement(45657652..45778945)
Genome browser
AA seq
3207 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEARQLLEARQRELQRIEE
AKQKIADQDKVKEEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDITNRNNPLSFGISLQ
NLSLQTSDKNWNPCLHDETAKLFYKLVRLDNLFAYWNVKSEMFYHGGYDESLVNLKQGVA
CHNVIPEGYDFVFRPISAKAKLLMNPRSDVDFSSPKMDLDVKLQDIAVEFNKPQYFSVME
LLESVDMMTRNLPYRKYRPDVPLHNNAKMWWKYVIYGILEVNVQPKLQMWSWEHIRHHRK
QVKNYKEMYKMKITSKKPNEEILKFLEEFEKTLDIFNITLARQQAEVEATKAGLKIYRPG
VKQDDENSGGWFSWIWGWSGEKKEEQKQEVKGSSLEELMTLEEKAKLYAAIGYSETAVDP
TLPKSYEAMKLSVKLLSMSISIRENKQTPELVKFTLDSLSTVFTQRPGAQAIRFETKVTS
LEVTGMSRENCTPCLLSSRTVYSDNSTSLLSITFETNPLDEKADQRLRIESQPLEIIYDA
RTINSLVDFFRPPKNVHLEQLTSATLMKLEEFREKTSTGLLYIIETQKVLDLKINLMASY
IIVPQKGFYDCTSNLLLLDLGSLKMKSKSRSDLSELKVGQSSIEDIMSRAYDSFDIQLTS
IQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARMPKFKLSGQLPLLSV
QISDQKLTSILELIDSIPKPESAPATTSPPKITEAAISPVLSVPHLSQGVLPVLDLHSFA
ESESEEEFYDALSSPVEDMPFFEAPSGSLTRASSIKRKKLRKQESLKNMTEFQLRFEVAE
VLIKLCRLTDNIETPVLQLEVVGLGTELKLRTFDMTANAFLHEVCLLCPEYMDDNGKPVY
IITTLDNVEDDLLTLEYIKADINGPELKTAYQNVLQKIKVNFSSLDVHLHTETLLNAMNY
LNNLLPKQETKVAEEPVHEKIEEKKDVLKKLTSKKSKYEDVIDLNICADLSCLRVFIREK
KHRIAEIHIEGLDSQVIMKKTATEVTAKLKNIIIMDSDEMALYKKALYITGKEVFNFKMI
SYMNATDGIAYTDMDVVDNSISLTVGCIQVVFVNKFVSSILAFINNFQAAKEALTEATVQ
AAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAVSANVLVADLGLITVKNHFFIAKS
KAWYNLPPVVDSMTVNLSELKLYRSYYEQDSLQSEVQLLQPLNLEVVVERNLAAAWYNEV
PDIEISGRLKPMNLILSQEDITTILRTLNENICGSSDASPPLPEPKDTTSHCSDIHSTSQ
QSAGVTVVTSAVVELHSPVKIKTTLKLDFRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAE
FKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKHGFEKKVMVDISY
KQGRDGTVLDMIVQEIYLCASMEFLLTVADIFLKANAESAAAQRNLKQSLPLKEQAPVQP
VSTMEMNIIVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVKEIQVKAC
PFLPEKRKGNVTTVLQPCDFFFEMKQSGTNPQSADLTIKSLTVKVSPIIINTVITITSAL
YRTAETTEEEISQIPPDLWNMKDVKNLKMWFLEESNENENTNPTSELIPTGESLKMSVES
VVLTLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLHSQLELEVHYFNEMFGVWEPLLEP
LEIEKTDLFKPWILEIKMKKKPKKALVESDAEENYKVPEHKTVINVSSKDQLNITLSKCG
LQMLSNLGTAFAEAASQTSDIFKKDRAPFVLINSLGLPITVSPSDSFSVLNVEFGAKIFH
LIDGENLNMEYVRTKNESDQFTAMTTLSSKRFYIQISPHNHSTVEKIPLTKVGRCIYRVR
HEESGVERSIVCQIDTVEGSKIITIRSPIQIRNHFSIPFNIFEEGRCLGTASPENEFNIP
LSSYRSALSLQPVANESGVDAEYDLCEGITFDEIMKNVDSLLQRKCQSVRSTNHSFVINI
VIAKDTLISTLCADDQWDFPYVVHLWPSVLLRNLLPYHITYSVEGNGNKYNTLEDGCSAQ
IHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPEISFTTFYCITELDKTELDIAVHVTY
TTGQMAIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQLM
VTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSFNITRIVTFTPFFMISNRSK
YTLEVSEEGKEKWIPIVLQQWCEKQWERELSGMCIPFWPENDANKLLVRVENSDLPPKKI
NFDKQENCLLLHLDNKLGGIIVDVNLTEHSTVITFSNYHDGAAPFLLINHTEEEIIEYGQ
SSLSQLEGCLQPNKAVLYTWADPAGSRKLTWKCGKITEEITPKEDKMKVLSLDCRKVVYL
ASFFEGLQRIVLITEDENVFKLAYESIKAELAEQEIILSLQDVGISLVNNYTKQEVSYIG
ITSSDVVWETKPEKKSRWRPMSVKQTDKLEQEFKDYSELTPSENKIIELESNVLVCLTPN
GCNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSFRIQVYRIQIQNQIPGAIFPFVFYPI
KPPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFLYALVEFFT
QTDVPNGQQLELFKKDVESLQEELMSVSSMDTSQISLYEYFHISSIKLHLSFSLSTGGED
SNKEERKNELIPLQSLNLLLKSIGATLTDVQDVVFKLAFFELNYHFCTTQQLQSAVLRHY
SKQAIKQMYVLILGLDVLGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKA
LVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRGGKGLV
SGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKVA
DSSEDVVSLRPPRFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKLRYIAHAMVNSTDLL
MVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGK
IINFKSPEDAKWILSKLEEVRENQPKS
NT seq
9624 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcgctggtcgtggacgtcctgaaccgcttcctcggcgactacgtggtg
aacctggacagctcccagctgaagctgggcatctggggaggagctgtagcactgaagaat
cttgaaataaaagaaaatgcactgagtcagctggatgtgccatttaaagttaaagcagga
catattggtcaacttaacttacagattccatggcaaaacctttatactcaacctgttgag
gcagttcttgatggagtttatttgcttattgtgcccacagccagcataaaatacgatgct
gaaaaagaagccaggcagctcttggaagcaaggcaaagggaattgcaaaggatagaagaa
gcaaagcagaaaatagctgaccaagataaagtaaaagaagagaaacaagacacttttgta
gaaaaactagtcactcaggtcatcaaaaatcttcaggtgaaaatttccaacatccatgtt
cgctatgaagatgatatcacaaatcggaataatcccttgtcatttgggatttcacttcag
aatctaagcttgcagacctcagataagaattggaatccgtgtttacatgatgaaactgcc
aagttgttctacaagcttgtacgactggataacctttttgcttactggaatgtgaaatcg
gagatgttctatcatgggggttatgatgaatcattggttaacttgaaacagggagttgcc
tgccacaacgtgattccagagggttatgattttgtattccgtccaatttcagctaaagcc
aaactccttatgaatcctcgatctgatgttgatttctcatctccgaaaatggatttagat
gtaaagttacaggacatagctgttgaattcaataaaccacagtatttcagtgttatggag
cttcttgagtctgttgatatgatgactcgaaatctgccgtatagaaagtacagacctgat
gttccattgcacaacaatgccaagatgtggtggaaatatgttatttatggcatccttgaa
gtaaatgttcaacctaaactccaaatgtggtcatgggaacatattcggcaccacagaaaa
caagtgaagaattataaggagatgtataaaatgaagataacatcaaaaaagccaaatgaa
gaaatcttaaaatttttggaggaatttgaaaagaccttggatatttttaacatcactcta
gcaaggcaacaagcagaagttgaggcaactaaagctggattaaaaatatacagaccagga
gtgaaacaagatgatgaaaattctggtggctggtttagttggatatggggctggtcaggt
gaaaaaaaggaggaacagaaacaagaagtaaagggttcaagtcttgaagagctgatgaca
cttgaagagaaagctaaactttatgcagcaattggatatagtgaaacagctgtggatcca
acgcttccaaaatcatatgaagccatgaagttgtctgtgaaactattaagcatgtctata
tcaataagagaaaacaagcaaacccctgagctggtaaaatttacattagatagcttgagt
acggtattcacacaacggccaggtgcacaagcaataagatttgaaacgaaagtaacctca
cttgaagttacgggcatgtcccgagaaaactgtacaccctgtctgctatcttctcgaaca
gtctattcagacaatagtacctcactcttaagcataacgtttgagactaatcctttggat
gagaaggcagatcagaggcttagaattgaatcacagccactggaaataatatacgatgca
agaacaataaatagcttagtagatttcttcaggcctccaaaaaatgtacatttagagcaa
ttgacgtctgcaactttgatgaagcttgaagaatttcgtgagaaaacatcaacaggtttg
ttgtatattatcgaaacccagaaagttcttgacctcaaaattaacctcatggcttcatac
ataattgttccacaaaagggattctatgactgtacatcaaatctactccttttggatctt
ggtagtcttaagatgaaaagcaaaagtcgttctgatttatcggaacttaaagtaggacaa
agcagtattgaagatataatgtcaagagcttatgacagttttgatatccagctcaccagt
atacagttactctacagcaaacatgatgaaaactggcaagaggctcgtaagctgaaatac
tcatctcaacatatcttgcagcccttggatgtgaaagtggaatttagcagagctatggtt
gtcacagatgcaagaatgcccaagttcaaactgtctggacaactgcctttactttcagtc
caaatatcagaccaaaagctgacaagtatcttggagctaattgatagcattcctaagcca
gaaagtgctcctgctaccacttctcctccaaaaataactgaggctgcgatatcccctgta
ctctcagtgccacatttatcacaaggcgtgcttcctgttttggatcttcattcgtttgca
gaatcagaatcagaagaagaattttatgatgctctaagcagtcctgtggaggacatgcca
tttttcgaagccccatctggttccctcacacgagctagcagtataaagcgaaaaaaacta
cgtaaacaagaatctttgaaaaatatgactgaatttcagctgaggtttgaagtagctgag
gtcttaataaaattatgccgccttactgataatatcgagacacctgtgctgcagcttgag
gttgtagggttaggcactgaacttaaattaagaacgtttgacatgactgcaaatgctttc
ctgcatgaagtttgtctgctgtgcccagagtatatggacgataatggaaaaccagtttac
ataattactactttggataatgtagaagatgatcttctcactttggagtatataaaggct
gatattaatggaccagaactgaagactgcgtatcagaatgttctacagaagataaaggtg
aacttttcttctcttgatgttcatctgcatactgaaactctcctgaatgccatgaactat
ctaaacaatcttctacccaaacaagaaactaaagttgcagaagaaccagttcatgaaaaa
attgaggagaagaaggatgttcttaagaaattaacatcaaaaaaatcaaagtatgaagat
gttatcgacctcaatatctgtgcggatttgtcctgtttacgtgtctttattagagagaaa
aaacacagaatagctgaaattcacattgaaggtctggatagccaagtgatcatgaaaaaa
acagcaacagaagtgactgcaaaattaaagaacatcattatcatggattctgatgagatg
gcattgtataaaaaggctctttacatcacgggaaaagaagtcttcaacttcaaaatgata
tcttatatgaatgctacagatggaattgcatatacagatatggatgttgttgacaatagt
attagcctaacagttgggtgtattcaagtagtttttgtcaacaagtttgtttcttctatt
ttggcttttataaataactttcaagctgccaaagaagctcttactgaggcaaccgttcaa
gcagcagagaaagcagctacaggtgtaaaagagctagcagagcgtagttctcgtttggca
ctagatatcaatatcaaagcacctgttgtgatagttccacaatcagcagtgtctgcgaat
gtcctggtggctgatcttggtctaatcactgtaaagaaccatttttttattgctaaatca
aaagcttggtacaatctcccacctgttgttgactctatgacagtgaatttgagcgaactg
aagttatacagatcatactatgagcaggactcattgcaaagtgaagtacaactgctgcaa
ccactcaatctggaagtagttgttgaacgaaatttagctgctgcatggtataatgaagtt
cccgatattgaaatatctggacgactcaagcctatgaatctaattctcagtcaggaagac
attacaacaatattgaggacactaaatgaaaatatatgtggaagctcagatgcatcacca
cctttaccagaaccaaaagatacgactagccattgtagtgatatccacagtacttcacag
caatctgcaggtgtaacagtcgtgacatcagctgtagtagaattgcattcacctgtaaaa
ataaaaacaacactaaaactggatttcagattcgactccctgactttggtgctgtatagt
ccaaactcaaaacaggttacaaatttggatcagagagatgacctgttgaagcttgcagag
tttaagttagttttaatgtcagctgcagtcaaaatgttatcagatggttcaatgaatgct
tcagtcaagctagcaaactgtacattagatgataaaagacagtcaatccagaaggctaca
ccaaggatggtggaaatgaagcatggatttgaaaagaaagttatggtggatataagctat
aagcaggggagagatggcactgttcttgacatgattgttcaagagatatacctttgtgca
agcatggaatttctacttactgttgcagatatattcctaaaggctaatgcagaaagtgct
gctgcacagagaaatctcaagcagtcattacctttaaaagagcaagcacctgtgcagcct
gtatctacaatggaaatgaacattattgttaaaaatccggagattgtgtttgtggctgat
ttaacaagaagtgatgctcctgcattggtggttacaacacagtgtgaagtcttcattaaa
aatagccctgaaaggtatagcatgacagctgctgttaaagagatacaagtgaaagcatgc
ccatttcttccagaaaaaaggaaagggaacgttactacggtactacagccttgtgacttc
ttctttgagatgaaacaatcgggtactaatccacagtcagctgatctaacgattaaatct
ctgacagtaaaagtttcaccaataatcataaatacagtaatcactattacctccgccctt
tatcgaactgcagaaacaacagaagaagagatcagtcaaattcctccagacttgtggaat
atgaaagatgtaaaaaatctaaaaatgtggtttcttgaagagtcaaatgaaaatgaaaac
acaaatccaacctctgaactgattcccacaggagagtcattgaaaatgagtgtagaatct
gttgttctaacacttgaagctggggttggccaccgaactgtaccaatgctcttagccaaa
tcctcatttcttggagaagtcaaaaactggagtacacttatcaacctacattctcagctt
gagctagaggtacattattttaatgagatgttcggggtgtgggaaccattacttgaacca
ctagaaattgagaagactgatttattcaaaccctggattctagaaatcaagatgaagaag
aagcctaaaaaagcattagttgaatcggatgcagaagaaaactacaaagttccagaacac
aaaacagtaataaatgtttcctcaaaagaccagctgaatattacactatccaaatgtggt
ttacaaatgttgagtaacttgggcacggcatttgctgaagcagcaagtcaaacttcagac
atcttcaaaaaagaccgagcaccatttgtactaataaattctttaggacttcccatcact
gtctcacccagtgattcctttagtgtcctcaatgtcgaatttggagcaaaaatatttcat
ttaatagatggagagaatttaaatatggaatatgtcagaactaaaaacgagagtgaccag
ttcaccgcaatgaccactctgagtagcaaaaggttttacattcaaatcagtccacataat
cattccactgtggagaagattccgttaacaaaagtgggtcgatgtatttacagagtaagg
catgaggaatcaggtgttgaaaggtccattgtctgccaaattgatactgttgaaggaagc
aagataataactatacgttctcctatccagataaggaatcatttttcaatcccgttcaat
atttttgaggagggaagatgtttagggactgcatcaccagaaaatgaattcaacatacca
ttgtcctcatacagatccgcactgagtttgcaacccgtagccaatgaaagtggagtggat
gcagaatatgatttgtgtgaaggaattacatttgatgaaattatgaaaaatgttgacagc
ttattacaaaggaaatgccagtctgtgaggtcaactaaccactcctttgtcatcaatatt
gttatagcaaaagacacattgatatctactttatgtgcagatgatcaatgggattttccg
tatgtcgttcatttatggccttctgttcttctccgcaatcttcttccatatcacattact
tactctgtagagggaaatgggaacaaatataacactctggaagatggatgttcagcccag
attcataatgcagtcttggatcaaacaaaactagatttacagttgctgaactatctagat
caaaactggaaaagtgagtaccatataaagagtaatctaccagaaatcagcttcacaaca
ttctactgcatcacggagctggataagactgaactggatattgctgtccacgtgacctac
acaactgggcagatggctatagcaattcacagtccatactggatggtaaataaaactggt
cgaatgttgcagtacaaagctgatggtatccaccgcaagcatcctccggattacaaaaag
ccgctacttttttctttccagcccaaaaacttcctccaaaataacaaggtacagcttatg
gtaactgatagtgaactgtcagatcagttttcactggacaccgttggaagtcatggttct
gtgaaatgcaagagtcataaaaaggagtatcaagttggtgtcaccataaacaacagcagt
tttaatattactagaattgtgactttcactccattttttatgatctcaaatagaagcaaa
tacactttggaagtatctgaagaaggcaaagaaaagtggatacccatcgttttgcaacag
tggtgtgagaaacaatgggaaagggaacttagtggcatgtgtattcccttttggcctgaa
aatgatgccaacaaactgcttgttagagttgaaaattcagatctgcctccaaagaagata
aattttgataagcaagaaaattgtctcttactgcatttggacaacaagcttggaggaatc
atagtggatgttaacctgactgaacattctacagtgatcaccttttctaattaccatgat
ggcgcagcaccatttctgttgataaaccatactgaggaagaaattattgagtatggacaa
agctccctcagtcaattggaaggctgtcttcagccaaataaggcagtgttgtacacttgg
gcagacccagcaggatctagaaaattgacatggaaatgtggaaaaataactgaggaaatc
accccaaaggaagacaaaatgaaagtactcagcctggactgtagaaaagtggtctattta
gcatcattttttgaaggtttgcagcgtattgtcctaatcactgaagatgagaatgttttt
aaactggcatacgaaagtataaaggcagaactagcagaacaagaaatcattctgtcttta
caagatgtcggaatttcattggttaataattatacaaagcaggaggtgtcctacattgga
attacaagttctgatgtggtttgggagacaaaacctgagaagaaatcaagatggagacca
atgagtgttaagcaaactgacaaattagaacaagaattcaaagattacagtgagctaact
ccttcagaaaataagattattgagttggaatccaatgtcttggtgtgtttaactcctaat
ggatgtaacatgaaaattcaacaacccaatgagattcctattagaaggaattacctgcca
gctttgaaagtagagtacagttcatcagcacatcagaagtctttcagaattcaagtttac
aggatacagatacaaaaccagattcctggagccatatttccctttgtgttctatcctatt
aaacctccaaagtccatcaccctggattcagcaccaaaaccatttaccgatgtcagtatt
gttatgagaactgcaggacattcacaaatatctcatattaagtacttcaaggtcctgatt
caagagatggatctcagattagatcttggtttcctctatgcactggttgaattctttaca
cagactgatgtaccaaatggccaacagctagaacttttcaaaaaggatgtggagtctctt
caagaagaactgatgagtgtgtcatcaatggatacatcacaaatcagcttgtacgagtac
ttccatatctcttcaattaagttacacttaagcttttcactcagtacgggtggtgaagat
agtaacaaagaagaaagaaagaatgaattgataccacttcaatccttgaatctccttctg
aagagtataggtgcgaccctcacagatgtacaagatgtcgtctttaagttggcattcttt
gaactcaattatcacttctgtactacacagcagctccaatcagcagtgttaaggcattat
tcaaaacaggctattaagcagatgtatgtgcttattcttggccttgatgtcttgggtaat
ccatttggatttataagagacttgtctgaaggagtagaagcattcttctatgaaccttat
cagggagccatccagggtcctgaagaatttgtagaaggaatggcactaggacttaaagct
ctagtagggggagctgttggtggattagctggtgctgcttcaaggatcactggtgctatg
gcaaaaggagtagctgcaataactatggatgaggattatcagcagaaaaggagagaagcc
atgaataaacagcccactggtctgagggagggtatcactcgtggaggaaaaggattagtt
tctggtttcgtcagtggcataacaggaatagttacaaaaccaataagaggagctcagaaa
gaaggagcagctggttttttcaaaggtgttggaaaaggcttagtgggagcagtagctaga
cctactggaggaatcatagacatggcaagcagcacatttcaaggtatcaaaaaagttgca
gattcatcagaagatgtggtgagcctgcgcccacctcgcttctttggtgaagatggagtt
attagaccttacagattaagagatggaaccggaagtcaaatgttacagaaaattgaaaat
ggaagatttgcaaaactcagatatattgcacatgctatggtcaacagtacagatctgtta
atggtgacaaagagtggcgtcttatttgtaacaaaagggacatttggacagttgacatgt
gaatggcaatacacttatgatgaatttactaaagaaccattcattgttgatggtagaaga
ttacgcattgaagcaaaggaacgagtaaagtctgtgttccatgccaaagaatttggaaaa
attattaattttaaaagtccagaggatgctaagtggatcctttctaaactggaagaagtg
agagagaatcagccaaaatcataa
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integrated database retrieval system
