Anser cygnoides (swan goose): 106049905
Help
Entry
106049905 CDS
T04896
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106049905 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acyg04121
]
106049905 (TRIM54)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106049905 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
CYP38_PsbQ-like
Prok-RING_4
Zn_ribbon_FGT1_2
RHH_9
DUF5799
CagA
FlgN
Motif
Other DBs
NCBI-GeneID:
106049905
NCBI-ProteinID:
XP_047911654
LinkDB
All DBs
Position
3:complement(122958676..122961974)
Genome browser
AA seq
406 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKVGGPGGGRR
GAQVLPPALALMPVSPQSELSDGIAMLVAGNDRIQAIITQMEEICRTIEENGRRQKQHLG
LRFDSLYSILEERKKELLQSIAREQEEKVQRVRGLIRQYGDHLEASSKLVETAIQAMEEP
QMAVYLQHSKELLKKITDMSKVSMSSRPEPGYENMDHFSINVDYVAEMLRTIEFQTEPLG
EDEGDGPTEGSEAAADEDRLDSLEAPEAAEDVGPRQKPASSPHGQH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtggggctgaagccgctgctggcggaggcgcggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcgggcggccggttccggtgcccgtcg
tgccgccacgaggtggtgctggaccggcacggggtgtacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcggccaggcccctgcacgccaaggcg
gagcagcacctgatgtgcgaggagcacgaggacgagcggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctctgcaaggtcttcggggcgcacaaggactgcgaggtt
gcgccgctgcctgcggtctaccagcgccagaaggtgggtggccctggcgggggccgacga
ggggcccaggtgctgcctcccgctctggccctcatgccggtctcaccccagagcgagctc
agcgatggcattgccatgctggtggcggggaacgaccgcatccaggccatcatcacccag
atggaggagatctgccggaccattgaggagaacggtcggcggcagaaacagcacctgggg
ctgcgcttcgactcgctgtacagcatcctggaggagcggaagaaggagctgctgcagagc
atcgcgcgggagcaggaggagaaagtgcagcgtgtgcggggcctcatccgccagtacggt
gaccacctggaggcttcctccaagctggtggagacagccatccaggccatggaggagccc
cagatggccgtgtatctgcagcactccaaggagctcctgaaaaagatcacagacatgtcc
aaggtgtcgatgagcagccgcccggagcctggctacgagaacatggaccacttctccatc
aatgtggactatgtggcagagatgctgaggaccatcgagttccagacagagccactggga
gaggatgagggggacggccccacggagggcagtgaggctgcggcggatgaggaccggctg
gacagcctggaggcacccgaggctgcagaggatgtggggccgaggcagaagccagcaagc
tctccccatggtcagcactga
DBGET
integrated database retrieval system
