Anser cygnoides (swan goose): 125181341
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Entry
125181341 CDS
T04896
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125181341 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
125181341 (SMARCC2)
03036 Chromosome and associated proteins [BR:
acyg03036
]
125181341 (SMARCC2)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125181341 (SMARCC2)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125181341 (SMARCC2)
PBAF complex
125181341 (SMARCC2)
GBAF(ncBAF) complex
125181341 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
125181341
NCBI-ProteinID:
XP_066841864
LinkDB
All DBs
Position
32:complement(3055890..3065053)
Genome browser
AA seq
1284 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHVVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPANEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPLARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQQTSASQQMLNFPDKSKEK
PADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEP
ERIGTAWGGAAASLCNEFWQEKGGAHPALVSPEESGTEEARAEAQPAEEKKEAKEPRDGT
AEEEAKEKLGDMAKKEEEKGKELEGEKESDKGDSDGTGDLEKEKEAKEAQDEVPKEPLEP
EAERKAKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEI
KLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQHLQQQQQQQ
PPPLPPGAQPLPATGTPWPPPPTRWARRPPGHGGPRRARGQPLPGVPPPQPPPPPGAPQP
GPAIPHAPAPFPGQQPPSQSLAGSLGGSGHPAVPGNAPAALPFGLPPSAIPFSMANPLAE
SIGATFPANPPALPLHGALASSMPPGGCPPRLTHPAWPCRTSRGARPPRTAPPSWPPCRE
ASFPTPASSQIKAPPADGPHRAQPQHGHPRPPHAVSPPPGAEDAAPCAPPTPPQARGDRP
QLPPPQNPRGSPPPHPTARFGIFL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctgtggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtgttcgggaagcacgtcagcaacgcgcccctcaccaagctgccgatcaaatgc
ttcttggatttcaaggcggggggagccctgtgccacatcctggcagccgcttataagttc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggatcgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggcccggccc
aacatcttcctgcaccaggagatcgagcccaagctgctgagcaagctgaaggacattgtc
aagaggcaccagggcacggtgaccgaggacaagagcaacgcgtcccacgtcgtctgcccc
gtccccgggaacctggaggaagaggagtgggtccggccggtcatgaagcgagacaagcag
gtcctgctgcactggggctactaccccgacagctacgacacctggatcccggccaacgag
atcgaggcctccgtggaggacgccccgacgccggagaagccccggaaggtccatgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactacgaggtgacc
gacgagaagagccccctcgcccgcaggaagaagatctcggccaagacgctgacggatgag
gtgaacagccccgactcggaccgtcgggacaagaaggggggcaactacaagaagaggaag
cgctcgccctcgccctcgcccaccccggaggccaaaaagaagaacgctaagaaggggccc
tccaccccctacaacaagtccaagcgcgggcaccgcgaggaggagcaggaggacctgacg
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtcactctgcccaaaaca
gtcaacaccaagaaggactcggagtctgcgcccgtcaaggggggcaccatgacagacctg
gatgagcaggaggacgagagcatggagacagccggcaaggacgaggaggagaacggcacc
gggagcaagggggagcaggccaagaaccccgacctgcacgaggacaacgtgacggagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaacggcaagaacaagtccaagacccccgaa
atatacctggcctaccgcaacttcatgatcgacacgtaccgcctgaacccgcaggagtac
ctcacctccaccgcctgccgccgcaacctggcgggcgacgtctgtgccatcatgcgggtc
cacgccttcctggagcagtggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgcccacctcccacttccacgtcctggccgacacgccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaagggaagccggag
ctgcagcagacctcggcctcacagcagatgctgaacttccccgacaagagcaaggagaag
ccggccgacatgcagaacttcggcctccgcaccgacatgtacaccaagaagaatgtcccc
tccaagagcaaagctgccgccagcgccacacgggagtggacagagcaggagacgctgctg
ctgctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccggacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctac
ctggaggactcggaggcgtccctggggcccctggcctaccagcccatccccttcagccag
tccggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgtgtc
gcctccgccgccgccaagtcggcgctggaggagttctccaagatgaaggaggaggtgccc
acggcgctggtggaggcgcacgtccgcaaggtggaggaggcggccaaggtgacgggcaaa
gccgaccccgcgttcgggctggagagcagcggcatcgccggcaccacctccgacgagccg
gagcggataggtaccgcctggggaggtgctgccgcgtctctgtgtaatgagttttggcag
gagaaagggggggctcaccctgcgcttgtgtccccagaggagagcggcacggaggaggcg
cgggcagaggcacagccggcggaggagaagaaggaggcaaaggagccccgggatggcacc
gccgaggaggaggcgaaggagaaactgggggacatggccaagaaggaggaggagaagggc
aaggagctggagggtgagaaggagtcggacaagggcgacagcgatggcacaggggacctg
gagaaggagaaggaggccaaggaggcacaggacgaggtgcccaaggagccactggagccc
gaggccgagcgcaaggccaaggtggagcgggacatcggcgaggggaacctctccaccgcc
gccgccgccgcgctggctgcagctgctgtgaaggccaagcacctggcggccgtggaggag
cgtaagatcaagtcgctggtggcgctgctggtggagacgcagatgaagaagctggagatc
aagctgcggcactttgaggagctcgagaccatcatggaccgggagcgcgaggcgctggaa
taccagcggcagcagctgctggcggaccgccaggccttccacatggagcagctgaagtac
gcggagatgcgcgcccgccagcagcacttccagcacctgcagcagcagcagcagcagcag
ccgcccccgctgccgcctggggcccagcccctgcccgccaccggcaccccctggcccccg
ccgcccacccgctgggcgcgccgcccgcccggccatggtggcccccgccgagcccggggg
cagccgctgcccggggtccccccgccgcagccgcccccgccaccgggcgccccgcagcct
ggcccggccatcccgcacgccccggcgccgttccccgggcagcagccgccgtcccagagc
ctggctgggagcctcggtggcagcggccaccccgccgtgcccggtaatgcgcccgcggcc
ctgcccttcggattgcctccatccgccatcccatttagcatggctaaccccctagccgag
tccatcggggccaccttccccgctaacccgcccgccctcccgctgcatggggccctggcc
agcagcatgccgcccgggggctgccccccccgcctaacccacccggcctggccctgccgc
acctcgcggggggctcggccgccgcgcacagccccgccatcgtggccgccgtgcagggaa
gcctccttcccaaccccggcctcctcgcagatcaaggccccccctgcagacggaccccat
cgcgcccagccccagcacggccacccccgtcccccccacgcagtgagcccccctcctggg
gccgaggacgctgcaccctgcgccccccccaccccgccgcaggcccggggagaccggccc
caactcccgcccccgcaaaaccccagaggaagcccccccccacaccccaccgcccgcttt
ggtatttttttatga
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