Anser cygnoides (swan goose): 125181488
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Entry
125181488 CDS
T04896
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1 isoform X1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
125181488 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
acyg04990
]
125181488 (LRFN1)
Cell adhesion molecules [BR:
acyg04515
]
Immunoglobulin superfamily
SALM family
125181488 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
acyg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125181488 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
fn3
Ig_2
LRR_9
LRRCT
Ig_DSCAM-DSCAML_C
LRR_14
Fndc10
Sp38
Motif
Other DBs
NCBI-GeneID:
125181488
NCBI-ProteinID:
XP_066840823
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Position
29:complement(3857607..3863696)
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AA seq
712 aa
AA seq
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MCWALLGLAGMYWALLGNSGPYWDVLGLIGPYWALLGCTGPYWGPTASPGRDRDGAVRGG
SAARPPSTAPPHPRRRRRRMAKLLVPLVVLGAVAGAQRCPPRCLCPAAAPSPTLLCARTG
LLAVPPSLDRGAVELRLADNFIGAVGRADFANMSSLVHLTLSRNGLRRLAPGAFADLRAL
RALHLDGNRLPALSGAQLRGLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLP
ALPWEAVAGMASLATLTLDHNLLERVPAGALARLPRLARLDLTANRLRALPPVPGPPGPS
LAAGGNPLHCNCELLWLRRLARPDGLESCASPPPLAGRLLWAVPEEELACRAPAIAGAAA
SPAAVLEGQPLRLGCAAAGDPPPALHWLGPDGRLVQNGSRRALGADGSLQLRVATLRDHG
AFTCVASNAAGEAAARVQVAVLPLPVPRRDGDGDGEAQPGPEPSDMARAGGNESRPAGER
RIVAAELTASSARIRWLPQRHVPGIRMFQIQYNSSLDDSLVYRLLPPSSRSFVLRDLAAG
REYDLCVSALYAEGTAAPPATRALGCVRFATAGGSPGCTAPRPHFLGGTVIIVIGAAIAA
SVLVFILILTARYKAARRLPAANVASVCSQTNGTHRPPEPEPPPPPPAPPAPPVLAPLGA
PGGARGLFPSHSYPRRARTRRHGSLPRLDAPDTLPTLRPSFGSTHWMLESTV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgggccttattgggccttgctgggatgtactgggccttactggggaattctgga
ccttactgggatgtgctcggccttattgggccttattgggccttactgggatgtactggg
ccttactggggccccactgcgagccccggacgggaccgagatggagccgtgagaggaggc
tccgccgcccgccccccgtccaccgcccccccccacccccggcgccgccggcggaggatg
gcgaagctgctggtgccgctggtggtgctgggggcggtggcgggggcccagcgctgcccc
ccccgctgcctgtgcccggcggccgcccccagccccacgctgctgtgcgcccgcacgggg
ctgctggcggtgccgcccagcctggaccgcggggcggtggagctgcgcctggccgacaac
ttcatcggggccgtggggcgcgccgacttcgccaacatgagcagcctggtgcacctcacg
ctgtcccgcaacgggctgcggcgcctggcgcccggcgccttcgccgacctgcgcgccctg
cgcgcgctgcacctggacggcaaccggctgccggcactgagcggggcgcagctgcggggc
ctggccagcctgcggcacctcatcctggccaacaaccagctggccgccatcgagcccgcc
gccttcgccgccttcgccgccaccgtggaggacctggacctgtcgcacaacaacctgccg
gcgctgccctgggaggcggtggccggcatggcgagcctggccacgctgacgctcgaccac
aacctgctggagcgcgtccccgccggcgccctggctcgcttgccgcgcttggcccgcctg
gacctcaccgccaaccggctgcgggcgctgccgccggtgccgggcccgccgggccccagc
ttggcggcgggcggcaacccgctgcactgcaactgcgagctgctgtggctgcggcgcttg
gcgcggccggacgggctggagagctgcgcctcgccgccgccgcttgccggccgcctgctc
tgggccgtgccggaggaagagctggcgtgccgcgcgcccgccatcgccggggcggccgcc
agcccggccgccgtgctggaggggcagccgctgcgcctgggctgcgccgccgccggggac
ccgccgccggcgctgcactggctgggccccgacgggcggctggtgcagaacggctcgcgg
cgggcgctgggggccgacggctcgctgcagctgcgggtggccacgctgcgggaccacggc
gccttcacctgcgtggcttccaacgccgccggcgaggcggccgcccgcgtgcaggtggcc
gtgctgccgctgcccgtgccccgccgggacggggacggcgacggcgaggctcagcccggg
cccgagccctcggacatggcccgcgccggcggcaacgagtcgcggccagcgggcgagcgg
cgcatcgtggcggccgagctgacggcctcctcggcgcgcatccgctggctgccgcagcgc
cacgtgcccggcatccgcatgttccagatccagtacaacagctccctcgacgactccctc
gtctacaggctgctgccgccctccagccggagcttcgtgctgcgggacctggcggcgggg
cgcgagtacgacctctgcgtctcggcgctctacgccgaaggcacggccgcgccgcccgcc
acccgcgccctgggctgcgtccgcttcgccacggccggggggagccccggctgcaccgcc
ccccggccccatttcctggggggcaccgtcatcatcgtcatcggcgccgccatcgccgcc
tccgtcctcgtcttcatcctcatcctcaccgcccgctacaaggccgcccgccgcctgccc
gcagccaacgtcgccagcgtctgctcccagaccaacggcacccacagaccccccgagccg
gaaccgccgccgccgccgccggcccccccagcacctccggtactggcacccttgggtgct
cctgggggtgcccgggggctttttcccagccacagctacccacggcgcgcccggactcgg
cggcacggctccctgccccgcctcgacgcgcccgacaccctccccaccctgcgcccgtcc
ttcggcagcacccactggatgctggagagcaccgtctaa
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