KEGG   Anser cygnoides (swan goose): 136788778
Entry
136788778         CDS       T04896                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
acyg  Anser cygnoides (swan goose)
Pathway
acyg03020  RNA polymerase
acyg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    136788778
  09124 Replication and repair
   03420 Nucleotide excision repair
    136788778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acyg03021]
    136788778
   03019 Messenger RNA biogenesis [BR:acyg03019]
    136788778
   03400 DNA repair and recombination proteins [BR:acyg03400]
    136788778
Transcription machinery [BR:acyg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     136788778
Messenger RNA biogenesis [BR:acyg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     136788778
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      136788778
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 136788778
NCBI-ProteinID: XP_066843559
LinkDB
Position
W:4260074..4265739
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKHGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVRYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNXPCYKTVDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctatcacatctccctggagcacgagatcctgctgcacccccggtacttcgggccc
aacctgctcaacaccgtcaagcagaaactcttcaccgaggtggagggcacctgcaccggc
aagcacggcttcgtgatcgcggtgacgacgatcgacaacatcggggcgggcgtcatccag
ccggggcgcggcttcgtgctctaccccgtgcgctacaaggccatcgtcttccggcccttc
aagggcgaggtggtggacgccgtggtgacgcaggtcaacaaggtcgggctcttcaccgag
atcgggcccatgtcctgcttcatctcccgccactcaatcccctcggagatggagtttgac
cccaactccaacnncccctgctacaagaccgtggacgaggacatcgtcatccagcaggac
gacgagatccgcctgaagatcgtgggcacgcgcgtcgacaagaacgacatcttcgccatc
ggctcgctcatggacgattacctgggtctcgtcagctga

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