Amycolatopsis cynarae: ORV05_05465
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Entry
ORV05_05465 CDS
T09969
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03030
DNA replication
acyn03430
Mismatch repair
acyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ORV05_05465 (dnaE)
03430 Mismatch repair
ORV05_05465 (dnaE)
03440 Homologous recombination
ORV05_05465 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyn03032
]
ORV05_05465 (dnaE)
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_05465 (dnaE)
Enzymes [BR:
acyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ORV05_05465 (dnaE)
DNA replication proteins [BR:
acyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ORV05_05465 (dnaE)
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ORV05_05465 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PAC2
Motif
Other DBs
NCBI-ProteinID:
WAL67238
LinkDB
All DBs
Position
1108317..1111892
Genome browser
AA seq
1191 aa
AA seq
DB search
MSNDSFVHLHVHTEYSMLDGAAKIAPLFAEAKRLEMPAVGMTDHGNMYGADEFYQQAKKA
GLKPIIGIEAYLAPESRFHKKPVFWGQTNQRGADEFGEGGDVSGGGAYTHMTMLAENATG
LRNLFRLSSLASTQGYYRKPRMDRELVSEFHEGIIATTGCPSGEVQTRLRLGQKGEALQA
ASDYKDIFGADNFFLELMDHGLPIERSVREGLLEIGRQLNLKPLATNDSHYVTQGQADSH
AALLCVQSGKTLNDPNRFKFDGDGYYLKSAQEMRAYWDLEVPGAADSTLLIAERVQPYDD
VYTHKDRMPVFQVPEGYDEASWLRAEVARGMKWRFPQGAPEGYDERIEKELEVIIGKGFP
AYFLVVADLINHARSVGIRVGPGRGSAAGSLVAYVLGITNLDPIPQKLLFERFLNPERVS
MPDIDIDFDDRRRGEMVRYATEKYGADRVAQVITFGTIKTKAAIKDSARVHFGQPGYAIA
DKISKALPPPIMAKDIPLSGIVDPQHERYGEAAEVRTLVETDEEVKTIFETARGLEGLIR
NAGVHACAVIMSSEPLMDAIPLWMRDDGSIITGWDYPSCEAIGLLKMDFLGLRNLTVIGD
AIDNIKSNRGEEVDLDTLGVDDPETYKLLSRGDTLGVFQLDGGPMRDLLRRMQPTLFDDI
VAVGALYRPGPMGMNAHNDYADRKNGRQQVKPIHPELEEPLKEILADTYGLIVYQEQIMH
IAQKVAGYTMGRADVLRRAMGKKKKEVLDKEFEGFHAGMRANGFSDEAIKALWDTILPFA
GYAFNKSHAAAYGLVSYWTAYLKANYPAEYMAALLTSVGDNKDKSAVYLSECRRLGIKVL
PPDVNESGQRFAAVGDAIRFGLGAVRNVGANVVESIIKTRGEKGKYSSFTDFLDKSELVV
CNKRVIESLIKAGAFDSLGNTRLSMIGVHEDAVEAVVPLKRQEAMGQFDLFGSAGDEEGD
AASSSSSSPLAHLKFNDEEWPRKQLLSYEREMLGLYVSAHPLDGAERILRKHAPRPIAAI
LDNPPKEGELIVSGLITSLERRVNKKGEPWAICTVEDMDAALEVLFFPKSYAMFSADLVE
DNAVLVKGRVNWREDKMSVFGGGLVPLDLSEAGNGDEEPPLVLHCTAEKLDKSVVGELKQ
TLLAHRGDTPVRLKLIGRRRETVFALYDYPVKVTSMLMGELKGIPGITAGT
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaacgattccttcgtccacctacatgtgcacaccgagtactcgatgctcgacggt
gcggcgaagatcgccccgctgttcgccgaggcgaagcggctggagatgcccgcggtgggg
atgaccgaccacggcaacatgtacggcgcggacgagttctaccagcaggcgaagaaggcg
gggctgaagccgatcatcggcatcgaggcctacctcgcgccggagagccggttccacaag
aagccggtgttctgggggcagaccaaccagcgcggcgccgacgagttcggcgagggcggc
gacgtctccggcggcggtgcctacacccacatgacgatgctcgccgaaaacgcaaccggt
ctgcgcaacctgttcaggctttcctccctggccagcacccagggctactaccgcaagccc
cgcatggaccgcgagctggtctcggagttccacgagggcatcatcgccaccaccggctgc
ccctccggcgaggtgcagacccggttgcggctggggcagaagggcgaggcgctgcaggcc
gcctccgactacaaggacatcttcggcgcggacaacttcttcctcgagctgatggaccac
gggctgccgatcgagcgctcggtccgcgaggggctgctcgaaatcggccgccagctgaac
ctgaagccgttggccaccaacgactcccactacgtcacccagggccaggccgattcgcac
gcggcgctgctgtgcgtgcagtcgggcaagacgctcaacgaccccaaccggttcaagttc
gacggcgacggctactacctcaagtccgcgcaggagatgcgcgcctactgggacctcgag
gtccccggcgcggcggattcgacgctgctgatcgccgagcgggtgcagccctacgacgac
gtctacacccacaaggaccggatgccggtcttccaggtccccgaggggtacgacgaagcc
agctggctgcgggccgaggtcgcccgcggcatgaagtggcggttcccgcagggcgcgccc
gagggctacgacgagcgcatcgagaaggaactcgaagtcatcatcgggaaggggttcccc
gcctacttcctcgtcgtcgccgacctgatcaaccacgcgcgcagcgtgggcatccgggtg
gggcccgggcgtggttcggccgccggttcgctggtggcctacgtgctgggcatcacgaac
ctggacccgatcccgcagaagctgctgttcgagcggttcctcaaccccgagcgcgtgtcg
atgcccgacatcgacatcgacttcgacgaccgcaggcgcggcgaaatggtgcgctacgcc
accgagaagtacggcgccgaccgcgtcgcccaggtgatcaccttcggcaccatcaagacc
aaggccgcgatcaaggactccgcgcgggtccacttcggccagcccgggtacgccatcgcc
gacaagatctcgaaggcgctgccgccgccgatcatggccaaggacatcccgctgtccggc
atcgtcgacccgcagcacgagcgctacggcgaagccgccgaggtgcgcacgctggtcgag
accgacgaagaggtcaagacgatcttcgagacggcgcgcgggctcgaagggctgatccgc
aacgccggtgtgcacgcctgtgcggtgatcatgtccagcgagccgctgatggacgcgatc
ccgctgtggatgcgcgacgacggctcgatcatcaccggctgggactacccgtcgtgcgaa
gccatcggcctgttgaagatggacttcctcggcctgcgcaacctcaccgtcatcggcgac
gcgatcgacaacatcaagtccaaccggggcgaggaggtcgatctcgacaccctcggcgtc
gacgaccccgagacctacaagctgctcagccgcggtgacacgctcggcgtgttccagctg
gacggcgggccgatgcgcgacctgctgcgccgcatgcagccgaccctgttcgacgacatc
gtcgcggtcggcgcgctgtaccgccccggcccgatgggcatgaacgcccacaacgactac
gccgaccgcaagaacgggcggcagcaggtcaagccgatccacccggaactggaagaaccc
ctgaaggagatcctggccgacacctacggcctgatcgtctatcaggaacagatcatgcac
atcgcccagaaggtcgccggctacaccatgggccgagcggatgtgctgcgccgggcgatg
ggcaagaagaagaaggaggtcctcgacaaggagttcgagggcttccacgccgggatgcgg
gccaacggcttctccgacgaggcgatcaaggccctgtgggacacgatcctcccgttcgcc
gggtacgcgttcaacaagagccacgcggccgcctacggcctggtctcgtactggacggcc
tacctcaaggcgaactaccccgccgagtacatggcggccctgctcacctcggtcggtgac
aacaaggacaagtccgcggtctacctgtccgaatgccgcaggctcggcatcaaggtgctg
ccgccggacgtcaacgagtccggccagcgcttcgccgccgtcggcgacgccatccgtttc
ggtctcggcgcggtgcgcaacgtcggtgccaacgtggtcgagtcgatcatcaagacgcgg
ggggagaagggcaagtactcctccttcaccgatttcctcgacaagtccgaactcgtcgtc
tgcaacaagcgggtcatcgaatcgctgatcaaggcgggcgcgttcgactcgctcggcaac
acacggctgtccatgatcggggtccacgaggacgcggtcgaagcggtggtgccgctcaag
cgccaggaggcgatgggccagttcgacctgttcggctcggcgggtgacgaagaaggcgat
gccgcgtcctcgtcgtcctcgtccccgctggcgcacctgaagttcaacgacgaggaatgg
ccccgcaagcagctgctgtcctacgagcgggaaatgctgggcctctacgtgtcggcccat
ccgctcgacggtgccgaacggatcctgcgcaaacacgctccccgccccatcgccgcgatt
ctcgacaacccgcccaaggaaggcgaactgatcgtctccggcctgatcacctcgctggaa
cgacgggtgaacaagaagggcgagccgtgggccatctgcacggtggaggacatggacgcc
gcgctggaggtgctgttcttccccaagtcctacgcgatgttctccgcggacctcgtcgag
gacaacgccgtcctggtgaagggcagggtcaactggcgtgaggacaagatgtccgtcttc
ggtggcggactggtacccctcgacctgtccgaagcgggcaacggtgacgaggaaccgccg
ctggtcctgcactgcacggccgagaagctcgacaagagcgtggtcggcgagctcaaacag
accctgctcgcgcaccgcggggacaccccggtccggttgaagctgatcggcaggcggcgg
gaaaccgtgttcgcgctctacgactacccggtcaaggtgacttcgatgctgatgggcgag
ctgaaggggatcccggggatcaccgcgggcacctga
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