Amycolatopsis cynarae: ORV05_09875
Help
Entry
ORV05_09875 CDS
T09969
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ORV05_09875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyn03019
]
ORV05_09875 (recQ)
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_09875 (recQ)
Enzymes [BR:
acyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ORV05_09875 (recQ)
Messenger RNA biogenesis [BR:
acyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ORV05_09875 (recQ)
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ORV05_09875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WAL68049
LinkDB
All DBs
Position
2082874..2084706
Genome browser
AA seq
610 aa
AA seq
DB search
MIATESDTTTPALDVLRRVFGYDSFRGEQEAIIEHVVAGGDALVLMPTGGGKSLCYQIPA
LVRDGVGVVVSPLIALMQDQVDALRALGVRAGFLNSTQDYRQRREVEEAFLAGELDLLHL
APERLRVEATVNLLERGRISLFAIDEAHCVSQWGHDFRPDYLALSQLHERWPRVPRIALT
ATATRATHDEIATRLNLGGASHFVASFDRPNIQYRIVPKNSPQKQLLDLLRTEHAGDTGI
VYCLSRASVEKTAEFLVANGIEALPYHAGLDAATRAANQARFLREDGLVVVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLADVVQQRKMIDTSEGDEA
HRRRLSRHLDAMLALCETVECRRVQLLNYFGQSGQPCGNCDTCLSPPESWDGTIAAQKLL
STVYRLQHERRQKFGAGQIIDILLGKQSPKVAQFRHDELTVFGIGSELSEGEWRGVVRQL
LAQGLLSVEGDYGTLVLTEASGEVLGRRREVRLRREPKREPRAAKPAKARQAAVELPEEA
APLFERLRAWRAATAKELGVPAYVVFHDATLRQIATERPQTAAALGRVSGVGESKLARYG
QQILDTLAEN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcgaccgaatcggacaccacgaccccggctctcgacgtgctgcggcgcgtcttc
ggctacgactcgttccgcggtgagcaggaagcgatcatcgagcacgtcgtcgccgggggc
gatgcgctggtgctgatgcccaccgggggcgggaagtccctgtgctaccagatccccgcc
ctggtgcgcgacggcgtcggagtggtcgtctcgccgctcatcgcgctgatgcaggaccag
gtcgacgcgctgcgcgctctgggcgtgcgggccggtttcctgaactccacccaggactac
cggcagcgccgcgaggtcgaggaggccttcctcgccggtgagctcgacctgctccacctc
gcgccggaacggctgcgggtcgaggccacggtgaacctgctcgaacggggcaggatctcg
ctgttcgcgatcgacgaggcgcactgcgtctcccagtggggccacgatttccggcccgac
tacctggccctgtcccagctgcacgagcgatggccgcgagtgccgcgcatcgcgctgacc
gccaccgccacccgggccacgcacgacgagatcgcgacccggctgaacctgggcggggcc
agccacttcgtggcgagcttcgaccggcccaacatccagtaccggatcgtgccgaagaac
agtccgcagaagcagctgctcgacctgctccgcaccgagcacgccggggacacaggcatc
gtctactgcctgtcccgggcttcggtggagaagacggcggagttcctggtcgccaacggc
atcgaggcgctgccctaccacgccggtctcgacgcggccacgcgcgccgcgaaccaggcg
cggttcctgcgggaggacgggctggtcgtggtcgccacgatcgccttcggcatggggatc
gacaaacccgacgtgcggttcgtggcgcacctcgacctgccgaagtccgtcgagggctac
taccaggagaccggccgggccgggcgggacgggctgccctcgaccgcgtggctggcctac
ggtctggccgacgtggtgcagcagcgcaagatgatcgacacctccgagggcgacgaggcg
caccggcgccgcctctcccgccacctggacgcgatgctcgcgctgtgcgagacggtggaa
tgccgccgcgtccagctgctcaactacttcggccagtccggacagccgtgcggcaactgc
gacacctgcctgtccccgcccgagtcgtgggacggcaccatcgcggcgcagaaactgctg
tccaccgtgtatcggctgcagcacgagcggcggcagaagttcggggccgggcagatcatc
gacatcctgctcggcaagcaaagcccgaaggtcgcccagttccgccacgacgagctcacc
gtgttcggcatcggcagcgagctgtccgagggcgagtggcggggcgtggtgcgccagctg
ctcgcgcaggggctgctgtcggtcgagggggactacgggaccctggtgctgaccgaggcc
agcggcgaggtgctcggccgccgtcgcgaggtccggctccggcgtgaaccgaaacgcgaa
ccccgcgcggcgaaacccgcgaaggcacgccaggcagcggtggagctgcccgaggaggcg
gccccgctgttcgaacgcctgcgggcctggcgagccgccaccgcgaaggagctgggcgtg
cccgcctacgtcgtgttccacgacgcgacactgcgccagatcgccacggaacgcccgcag
acggcggccgcgctcggccgggtgagcggagtcggcgagagcaaactcgcccgttacggc
cagcagatcctcgacaccctcgccgagaactga
DBGET
integrated database retrieval system
