Amycolatopsis cynarae: ORV05_12825
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Entry
ORV05_12825 CDS
T09969
Name
(GenBank) DUF6531 domain-containing protein
Organism
acyn
Amycolatopsis cynarae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
WHH
DASH_Dad2
OCRE
PPE
T7SS_signal
Colicin-DNase
BORCS6
EspB_PPE
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
WAL68614
LinkDB
All DBs
Position
complement(2701255..2705679)
Genome browser
AA seq
1474 aa
AA seq
DB search
MSNPLVAAKQDSTTWHSGINVLDDAAGVYDGVQSGSWIEGGIAAFGTGMDLLTMAMNPVG
TLISYGLNWLIEHVKPLQDALNQLAGDADQIAAYSQTWKNVAEAVQKAAKELSDTATRDT
ANWTGNAADTYRAQLKNKIDHLGAAATCAETISTVVQIVGVITGAVRGMVRDMVTQAVGD
FIQDALEEVCSLGLGTPVVVAQVVEQVSAWIEKIGALIKKLINSVEALRPMMSKLEEIFA
AIKKVMNALHGHTEEPHLPGDGSTHASSASGEPHTTPAGEDAPTTSAGDHPSDPPPTSAG
GDGTPPSHEGGTGDPSMKENSGDPQADGRQKQCAPGSGDPVDLTTGQMFMGQTDLELPGV
LPLVLRRTHFSDYRVGRWFGRSWASTLDQRIEIEDDAIYFADEDGARLRYPLPGASGNPV
LPAAGPRWPLERADDGTYRISRPERNQVLSFQPTQAPVRPVAEITDRNGNRIEFRYDSGG
SPVEIVHSGGYRIGVDTADGLVTGLRLLADQNQEQDTGTVLKRYRYNERRQLAEVLNSSN
RPMLFDFDLAGRITRWQDRNGEWYRYEYDGRGRVVRTEGSGGALTGTWLYDTENRVTVYT
DALGNASTYHYNEAYQIVREIDPLGHQVLREWDGYDRLTAVTDALGRVTRYTYDEAGNLT
TVTRPDGTQELTEYNEFGLPATVVDPNGAVWRHRYDGRGNRVETIDPLGARTRFGYDERG
HLKSVVDAMGNTRSLVTNAAGLPIAVTDPLGATTRGSRDQFGRLASVTDELGRVTRFTWT
VEGEMLTRTDPGGATEHWRYDGESNRVEHVTADGRVTRMLTTHFDLPAVQIDPDGARTEF
RYDRELRLVAVINPVGQVWHYDYDAAGNLVRERDFDGRELVYHYDAAGQLVRRVNGAGEA
VDYVRDPRGHVIEQRTSDDTARFEFDAIGRMVRAVNAHADVVFERDLLGRVLAETVNGRT
VSSRYDVLGRRVFRRTPTGAESEWSFDARHQPVALRSGGRTVSFGHDPAGRETERLLDTG
TILAQSWDITDRMTAQTLSTMAGGRATARPIRRREYRYGPGGLLSAVVDQDGTRSFDLDP
AGRVTGVEGPGFTERYAYDRAGNLAASPDVRYGHDAQGRVVLRTRKRLSAKPAVWRYSWN
AEDRLTAVITPDGTRWRYLYDALGRRIAKQRLAPDGLLLEQVDFSWDGTAIAEQTHSSGL
SVSWNYEPRSYRPATQVERVPDPRGSQEWVDSRFYSIVTDLVGTPTELVDPSGNTAWRSA
TTLWGAALGEVTNTASTPWRFPGQYHDPETGLHYNFQRYYDPVSGRYCSKDPLGLAGGPN
PSGYVRNPWHWIDPLGLAESCDPPLPERPESSPAYSVAYEAQLDPAKDFPGRSDKHHFAV
GNRQLHSAFESDPAFAKAMNELYPGIVDNVKPGPRGAFPRTSPHEDLTWHHEANRPGTLQ
LVPRAHHAGPGPVQGSLHPGGRGGMENWGGGRRR
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccactggtcgcggcgaaacaggactccacgacctggcattccggaatcaac
gtcctcgacgacgcggccggggtctacgacggtgtgcagtcggggtcgtggatcgagggc
ggcatcgccgcgttcggcaccggcatggatctgctgaccatggcgatgaacccggtcggc
accctgatctcctacggcctgaactggctcatcgagcacgtcaaaccgttgcaggacgcg
ctcaaccaactggccggggacgccgaccagatcgccgcctactcccagacgtggaagaac
gtggcggaggcggtgcagaaggccgccaaagaactgtccgacaccgccacccgcgacacg
gcgaactggaccggcaacgccgccgacacctaccgcgcccagctcaagaacaagatcgac
cacctcggcgcggccgccacctgcgccgagaccatctcgaccgtggtgcagatcgtcggc
gtcatcaccggcgccgtgcgcggcatggtccgcgacatggtcacccaggccgtcggcgac
ttcatccaggacgccctcgaagaggtctgctcgctcgggctgggcactcccgtcgtggtc
gcgcaggtcgtcgaacaggtctccgcctggatcgagaagatcggcgccctgatcaagaag
ctcatcaactccgtcgaggcgctgcgcccgatgatgagcaaactcgaagagatcttcgcc
gccatcaagaaagtcatgaacgccctgcacgggcacaccgaagaaccccacctgcccggc
gacggttccacgcacgcttcgtccgcctccggcgaaccgcacaccacccctgccggcgag
gatgcccccaccaccagtgccggcgaccacccttccgacccgccaccgacctcggcgggc
ggcgacggcacgcctccctcccacgagggcggaaccggggacccgtcgatgaaggagaac
agcggcgacccgcaggccgacggacggcagaagcagtgcgcccccggctccggggacccg
gtggacctcaccaccggtcagatgttcatgggccagacggatctcgaactgcccggcgtg
ctgccactggtgctccggcggacccatttctccgactatcgcgtcggccgctggttcggc
cgaagctgggcgtccacactggaccagcgcatcgagatcgaagacgacgcgatctacttc
gccgacgaagacggcgcgcggctgcgctatcccctcccgggcgcgagcggcaacccggtc
ctcccggcagccgggccgcgttggccgctcgaacgcgcggacgacggcacgtaccgcatc
agccgcccggagcgcaaccaggtcctgagtttccagcccacccaggcgccggtgcggccg
gtcgcggagatcaccgaccgcaacggcaaccgcatcgaattccgttacgacagcggcggc
tcaccggtcgaaatcgttcattccgggggttaccggatcggcgtggacaccgcggacggc
ctggtcacggggctgcggctgctcgcggaccagaaccaggagcaggacaccggcaccgtg
ctgaagcggtaccggtacaacgaacggcggcagctggccgaggtgctgaactcctcgaac
cgtcccatgctgttcgacttcgacctggccggccgcatcacccgctggcaggaccgcaac
ggcgagtggtaccggtacgagtacgacggacgaggccgcgtggtccgtaccgagggctcc
ggcggcgcgctgaccggtacctggctctacgacacggaaaaccgggtcaccgtctacacc
gatgcgctcggcaacgccagcacctaccactacaacgaggcctaccagatcgtccgggag
atcgacccgctcggccaccaggtgctccgcgagtgggacgggtacgaccgcctcaccgcc
gtcaccgatgcgctcgggcgagtcacccgctacacctacgacgaggccggcaacctcacg
accgtcacgcggcccgatggcacccaggaactcaccgagtacaacgagttcggtctgcct
gccacggtggtcgacccgaacggcgcggtgtggcgccaccgctacgacgggcgggggaac
cgggtcgagaccatcgatccgctcggtgcccggacccggttcggctacgacgagcgcggc
cacctgaagtccgttgtggacgcgatgggaaacacccggagccttgtcaccaacgccgcc
ggcctgccgatcgcggtcacggatccgctcggcgcgaccacgcggggatcccgcgaccag
ttcggcaggctggcgagcgtcaccgatgaactcggccgcgtcacccgcttcacctggacc
gtggagggcgagatgctcacccgcacggatccgggcggtgccaccgaacactggcgttac
gacggcgagagcaaccgggtcgaacacgtcaccgcggacggccgcgtcaccaggatgctg
accacgcatttcgacctccccgcggtgcagatcgaccccgacggcgctcgcaccgagttc
cgctacgaccgggagctccggctggtcgcggtgatcaaccccgtgggccaggtctggcac
tacgactacgacgcggccgggaatctggtccgggagcgggatttcgacggccgtgagctc
gtctaccactacgacgcggccgggcaactcgtccggcgggtcaacggagccggcgaagcc
gtcgactacgtgcgcgaccctcggggccacgtcatcgaacagcgaacgtccgacgacacc
gcgcggttcgagttcgacgccatcggccggatggtgcgcgcggtgaacgcgcacgccgac
gtggtcttcgagcgcgacctgctgggccgcgtcctggccgaaaccgtgaacgggcggacc
gtttcctcacgttacgacgtgctcggccgccgggtgttccgccgcaccccgaccggtgcc
gagagcgaatggagtttcgacgcgcggcatcagcccgtcgcgctgcgaagcggcgggcga
acggtctccttcggacacgatccggcgggccgcgagaccgagcgactgctcgacaccggc
acgatcctcgcgcagagctgggacatcaccgaccggatgacggcccagacactgtccaca
atggccggggggcgcgcgaccgcccgcccgatccgccgccgcgaataccggtacgggccc
ggcggcctgctctcggccgtcgtcgaccaggacggcacccggtccttcgacctcgacccg
gccggccgggtgaccggcgtcgaaggaccggggttcaccgagaggtacgcctacgaccgg
gcgggcaacctcgccgcatcgcccgatgtccggtacgggcacgacgcacagggacgggtg
gtgttgcggacgcgcaagcgcctctccgcgaagccggccgtgtggcgctattcctggaac
gccgaggaccgcctgaccgcggtgatcaccccggacggcacgcgctggcgttatctctac
gacgcgctcgggcgccgcatcgccaagcagcggcttgccccggacggcctcctcctcgaa
caggtcgacttctcctgggacggcacggcgatcgcggaacagacccacagctccggattg
tcggtcagctggaactacgagccccgcagctaccggcccgcgacccaggtcgagcgcgtg
ccggatccgcggggctcgcaggaatgggtggacagccggttctactcgatcgtcaccgac
ctggtgggaacgccgacggaactggtcgacccgtcgggcaacacggcctggcgctccgcc
accacgctgtggggcgcggcgttgggagaggtgacgaacaccgcttcgacaccctggcgc
tttcccggtcagtaccacgatccggaaaccggcctgcactacaacttccagcgctactac
gatccggtctccggccgatactgcagcaaggatccgctgggactggccggcggcccgaac
ccgagcggctatgtgcgcaacccctggcactggatcgacccgttggggctggcggagagc
tgcgaccccccgctgccggagcggccggaaagcagccccgcctattcggtggcctacgag
gcccagctcgaccccgccaaggacttccccggtcgcagcgacaagcaccatttcgcggtc
ggcaaccgccagttgcactccgccttcgagtccgatccggccttcgcgaaggcgatgaac
gagctgtacccgggcattgtcgacaacgtgaagccgggaccccgtggggccttcccgcgc
acctccccgcacgaggatctaacctggcaccacgaagccaaccggccgggcacactgcag
ctcgttccccgggcgcaccacgcggggcccggccccgtccaggggtcgctccacccgggt
ggccggggcggcatggagaattggggaggtggccggcgccgatga
DBGET
integrated database retrieval system
