Amycolatopsis cynarae: ORV05_20530
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Entry
ORV05_20530 CDS
T09969
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03030
DNA replication
acyn03410
Base excision repair
acyn03420
Nucleotide excision repair
acyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ORV05_20530 (polA)
03410 Base excision repair
ORV05_20530 (polA)
03420 Nucleotide excision repair
ORV05_20530 (polA)
03440 Homologous recombination
ORV05_20530 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyn03032
]
ORV05_20530 (polA)
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_20530 (polA)
Enzymes [BR:
acyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ORV05_20530 (polA)
DNA replication proteins [BR:
acyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ORV05_20530 (polA)
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ORV05_20530 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ORV05_20530 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WAL63400
LinkDB
All DBs
Position
complement(4294599..4297334)
Genome browser
AA seq
911 aa
AA seq
DB search
MSPSENQSVANATATLATAEQARLLLIDGHSMAYRAFFAVPADRFRTSTGQVTNAVFGFT
SMLINLLRDEQPTHLAVAFDVSRQTFRSETYADYKATRSATPDDFKGQVDLVKEVLGVLG
IPVLVKEGYEADDIIATLATQAVAEDYRVLICTGDRDALQLVNDSVTVLYPRKGVSDLVR
YDPAAVAEKYGLSPEQYPDFAALRGDPSDNLPGIPGVGEKTATKWIQQFGSLATLIDRVD
EVKGKVGDALRAHVDAVLLNRHLTELVRDVPLEAVPDDLALRPWDRDAVHRLFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGDAVPTGGLTAWLAEHSESGRPFGLSFRTTGSSVAAD
VRSIALAAPDGQGAYLDPSTMDEADEKALAAWLADPQVAKAGHALKPALHAVLLRGWSFA
GLAMDTALAAYLVRPGQRSFELDDLVLRYLQRELRSDGAEGDGQLSLLDAGDGDQKLVQS
ELVRARAVAELAGSLTAELGKIGGTRLLEEIELPLLEVITELEAAGVAVDIEQLTELESH
YAARVRQAEENAFQVIGKQINLGSPKQLQVVLFDELAMPKTKRTKTGYTTDADALQTLFE
KTEHPFLQHLLEHRDASRLRSTVEGLIKAIADDGRIHTTLHQTIAATGRLSSVDPNLQNI
PIRTEEGRRIRDAFVVGTGYAELMTADYSQIEMRIMAHLSGDEALIEAFQSGFDFHAATA
AKVFAVEPGEVTGAQRAKIKAMNYGLAYGLSAYGLSQQLRISTEEAKTLMDDYFARFGGV
RDYLQSVVVEAGKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKV
AMLNVHRALRQEGLGTRLLLQVHDELVLEVAEGEHEAVEALVRKEMGAACALAVPLEVSV
GSGRSWNDAAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccagcgagaaccaatccgtagcgaacgccacagcgaccttggccaccgccgag
caggcgcggctgctgctgatcgacggccattcgatggcctaccgcgccttcttcgccgtc
cccgcggaccggttccgtacctcgaccgggcaggtcaccaacgcggtcttcgggttcacc
tcgatgctgatcaacctgctgcgcgacgagcagcccacccatctcgcggtggccttcgac
gtgtcgcgccagaccttccgctccgagacctacgccgactacaaggccacccgctcggct
actccggacgacttcaagggccaggtcgacctggtcaaggaggtgctgggggtgctcggc
atcccggtgctggtcaaggagggctacgaggccgacgacatcatcgccacgctcgccacg
caggcggtggccgaggactaccgggtcctcatctgcaccggcgaccgggacgccctgcag
ctggtcaacgattcggtcaccgtgctgtacccgcgcaagggcgtgtccgacctggtccgc
tacgacccggccgcggtggcggagaagtacggcctgagccccgagcagtacccggatttc
gcggccctgcgcggcgacccctcggacaacctgcccggcattcccggggtgggggagaag
accgcgacgaagtggatccagcagttcggctcgctggccaccctcatcgaccgggtcgac
gaggtcaagggcaaggtcggtgacgcgctgcgggcccatgtggacgcggtgctgctcaac
cggcacctgaccgaactggtgcgcgacgtgccgctggaggccgtgccggacgatctggcg
ctgcgcccgtgggaccgggacgccgtgcaccggctgttcgacgagctggagttccgcgtc
ctgcgggatcgcctgttcgcgacgctgcagagcgccgagcccgaggccgaggagggcttc
gaggtctccggtgacgcggtgcccaccggcgggctgaccgcgtggctggccgagcacagc
gaaagcggcaggccgttcggcctgtccttccgcaccacgggctcgtcggtggccgcggac
gtgcgttcgatcgcgctggccgccccggacggacagggcgcctacctcgatccgtccacg
atggacgaggcggacgagaaggcgctcgcggcctggctggccgacccgcaggtagccaag
gccgggcacgcgctgaagcccgcgctgcacgcggtgctcctgcgcggctggtccttcgcc
gggctggccatggacaccgcgctggcggcctacctggtgcgccccggccagcggtcgttc
gaactggacgacctcgtgctgcgctacctgcagcgtgagctgcgttccgatggcgccgag
ggcgacggtcagctgtcgctgctcgacgccggggacggggaccagaagctcgtgcagtcc
gagctcgtccgcgcccgtgcggtggccgaactcgccggttcgctcaccgccgagctcggc
aagatcggtggcacccgcctgctcgaggagatcgagctgcccctgctcgaggtgatcacc
gagctcgaagcagccggggtggccgtcgacatcgagcagctcaccgaactggagtcgcac
tacgcggcccgcgtgcggcaggccgaagagaacgctttccaggtcatcggcaagcagatc
aacctcggctcgccgaagcagctgcaggtggtgctgttcgacgagctcgccatgccgaag
accaagcgcaccaagaccggctacaccaccgacgccgacgccctgcagacgctgttcgag
aagaccgagcacccgttcctgcagcacctgctggagcaccgcgacgccagccgtctgcgc
tccactgtggagggtctgatcaaggcgatcgccgacgacggccggatccacaccactctg
caccagaccatcgccgccaccggccggttgtcctccgtggacccgaacctgcagaacatc
ccgatccgcaccgaggagggccgccggatccgggacgccttcgtggtgggcaccggttac
gccgagctgatgacggcggactacagccagatcgagatgcggatcatggcgcacctgtcc
ggggacgaggccctgatcgaggccttccagtccgggttcgacttccacgcggccaccgcg
gcgaaggtgttcgcggtcgagcccggggaggtcaccggggcgcagcgggcgaagatcaag
gcgatgaactacgggctggcctacggcctttccgcctacgggctgtcccagcagctgcgg
atctccaccgaggaggccaagacgctgatggacgactacttcgcccgcttcggcggggtc
cgcgactacctgcagagtgtggtggtggaggccgggaaggtcggttacaccgaaaccatc
ttcggccgccgccgttacctgcccgacctcaacagcgacaaccgccagcgccgcgagatg
gccgagcggatggcgctcaacgccccgatccagggcagtgccgccgacatcatcaaggtg
gcgatgctcaacgtgcaccgggcactgcggcaggagggcctgggcaccaggctgctgctg
caggtccacgacgaactggtgctcgaggtggccgagggggagcacgaggcggtggaagcg
ctggtgcgcaaggagatgggcgcggcgtgtgcactggcggtgccgctggaggtctcggtc
ggctccggccggtcgtggaacgatgcggcgcactaa
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