Amycolatopsis cynarae: ORV05_24160
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Entry
ORV05_24160 CDS
T09969
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03030
DNA replication
acyn03430
Mismatch repair
acyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ORV05_24160 (holA)
03430 Mismatch repair
ORV05_24160 (holA)
03440 Homologous recombination
ORV05_24160 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyn03032
]
ORV05_24160 (holA)
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_24160 (holA)
Enzymes [BR:
acyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ORV05_24160 (holA)
DNA replication proteins [BR:
acyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ORV05_24160 (holA)
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ORV05_24160 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WAL64068
LinkDB
All DBs
Position
complement(5054800..5055774)
Genome browser
AA seq
324 aa
AA seq
DB search
MSSPAVPSLHLVLGEEELLVERAVRAALETARKTDPAAELTKAKAAELTVPGLAELVSPS
LFAEGRVIVLEAAQDIGQELADAVLSYLKMPAEGVVLVVVHTGGGRSKAAKALPAALRKA
GAQVTECPKITKSAEREMFVRNEVRQAGGRIEPGAVAVLLDAVGSDLRELASASAQLVAD
TGGKVDEEAVRRYHRGRADVTGFAVAEKAVGGDRAAALESMRWAEQIGVPHVLVADALAD
AVRTIARVSAAGRGNPNQLAGELGMPPWKVRKAQGQSRGWSPAGLAAAMGIVARVNAEVK
GQAADPSYALERAILDLADARDRH
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgcccgcggtcccgtcccttcatctcgtcctcggcgaagaggaactcctcgtc
gagcgtgccgtgcgtgccgcgctcgaaacggccaggaagacggatcccgcggcggaactc
acgaaggccaaggcggccgagctcaccgtgcccggactggccgaactggtcagcccctca
ctgttcgccgagggccgggtgatcgtgctcgaggccgcgcaggacataggacaggaactc
gccgacgccgtgctgtcctacctcaagatgcccgccgagggtgtggtgctcgtcgtcgtc
cacaccggtggcgggcggagcaaggcggccaaggcgctgcccgccgcactgcgcaaggcg
ggcgcacaggtcaccgaatgcccgaagatcaccaagtccgccgagcgggaaatgttcgtg
cgcaacgaagtccgccaggccgggggccggatcgagccgggcgcggtggccgtgctcctc
gatgcggtcggttcggatctgcgggaactggcgtcggcgtcggcccaactggtcgccgac
accgggggcaaggtggacgaggaggcggtccgccgctaccaccggggacgggccgacgtg
accggtttcgcggtcgccgagaaggccgtgggcggtgaccgggccgccgcgctggagtcg
atgcgctgggccgagcagatcggcgtgccgcacgtgctggtcgcggatgcgctcgcggac
gccgtccgcacgatcgcgcgggtgtccgccgcgggccgcggcaatccgaaccagctggcg
ggcgaactgggcatgccgccctggaaggtgcgcaaggcacaggggcagtcgcgcggatgg
tccccggccgggctcgccgccgcgatgggcatcgtggccagggtgaacgccgaggtcaag
ggccaggcggccgatccgtcctacgccctcgaacgggcgattctcgatctcgccgacgca
cgcgaccggcactga
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