Amycolatopsis cynarae: ORV05_24975
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Entry
ORV05_24975 CDS
T09969
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn02024
Quorum sensing
acyn03060
Protein export
acyn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ORV05_24975 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ORV05_24975 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ORV05_24975 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
acyn02044
]
ORV05_24975 (ffh)
Enzymes [BR:
acyn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ORV05_24975 (ffh)
Secretion system [BR:
acyn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ORV05_24975 (ffh)
Eukaryotic Sec-SRP protein
ORV05_24975 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
cobW
ArsA_ATPase
Zeta_toxin
APS_kinase
AAA_31
TctA
AAA_18
AAA_30
AAA_24
NPHP3_N
ParA
AAA_33
NACHT
AAA_16
MobB
TsaE
Thymidylate_kin
6PF2K
Motif
Other DBs
NCBI-ProteinID:
WAL64211
LinkDB
All DBs
Position
complement(5223674..5225203)
Genome browser
AA seq
509 aa
AA seq
DB search
MFDTLSDRLTSALQTLRGKGKLTDADIDATAREIRIALLEADVALPVVREFIAQIKQRAK
GAEVSGALNPAQQVVKIVNEELIGILGGETRRLNLAKNPPTVIMLAGLQGAGKTTLAGKL
ALWLKKQGHAPLLVACDLQRPNAVTQLQVVGERAGVTTFAPEPGNGVGDPVDVARRGVEE
ARHAQHDVVIVDTAGRLGVDEELMRQAADIRDAVKPDETLFVVDAMIGQDAVTTAEAFRD
GVGFTGVVLTKLDGDARGGAALSVRQVTGQPILFASNGEKLDDFDIFHPDRMASRILGMG
DLLTLIEQAEQAFDAEQAEKAAAKLGTGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKEQLAQVDDKHLDRLQAIIRGMTPAERADPKIINGSRRQRIAVGSGVTVREVNDLVNRF
FEARKMMQQMAGRFGFGFGGGGGSKGKKGKKGKKGKGRGPTQPKMRGGFPAGMPMLPPGT
GGPDLSQLGGGLNDVPGFDPSKFKLPKNK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctctccgaccggctcacctcggccctgcagacactgcggggcaagggc
aagctgaccgacgccgacatcgacgccacggcgcgcgagatccgcatcgcgctgctggag
gccgacgtcgcgctgcccgtggtccgcgagttcatcgcgcagatcaagcagcgggcgaag
ggggccgaggtctccggcgcgctgaatcccgcgcagcaggtcgtcaagatcgtcaacgag
gagctcatcgggatccttggcggcgagacccggcggctcaacctcgccaagaacccgccg
acggtgatcatgctcgccggtctgcagggtgccggtaagaccacgctcgcgggcaagctc
gcgctctggctcaagaagcagggccacgcgcccctgctggtcgcctgtgacctgcagcgc
cccaacgcggtcacccagctccaggtggtcggcgagcgggccggggtcaccacgttcgcc
cccgaaccgggcaacggcgtcggcgacccggtggacgtggcgcgccgcggtgtcgaggag
gcccggcacgcgcagcacgacgtggtcatcgtcgacacggcgggtcgtctgggtgtcgac
gaggaactgatgcggcaggccgccgacatccgggacgcggtgaagccggacgagacgctc
ttcgtcgtcgacgcgatgatcggccaggacgcggtgaccaccgccgaagccttccgtgac
ggcgtcggtttcaccggcgtggtgctcaccaagctcgacggcgacgcccgcggtggtgcc
gcgctgtcggtgcggcaggtcaccggccagccgatcctgttcgcctccaacggcgaaaag
ctcgacgacttcgacatcttccacccggaccggatggccagccggatcctgggcatgggt
gacctgctcaccctgatcgagcaggccgagcaggccttcgacgccgagcaggcggagaag
gccgccgccaagctcggtaccgggcagctgaccctggaggacttcctcgagcagatgctc
gcggtccgcaagatgggcccgatcggcaacctgctcggcatgctgccgggcgcgggccag
atgaaggagcagttggcccaggtcgacgacaagcacctcgaccggctccaggcgatcatc
cgggggatgaccccggccgagcgggccgacccgaagatcatcaacgggtcccgcaggcag
cggatcgcggtgggctccggcgtcaccgtgcgcgaggtcaacgacctggtcaaccgcttc
ttcgaagcccgcaagatgatgcagcagatggccggccggttcggcttcggtttcggcggg
ggcggcgggagcaagggcaagaagggtaagaagggcaagaagggcaagggacgcggcccg
acgcagccgaagatgcgcggaggtttccccgccggcatgccgatgctgccgccgggcact
ggcggcccggacctgtcgcagctcggtggcgggctgaacgacgtgccgggcttcgacccg
agcaagttcaagctccccaagaacaagtaa
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