Amycolatopsis cynarae: ORV05_25220
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Entry
ORV05_25220 CDS
T09969
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ORV05_25220 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_25220 (mutM)
Enzymes [BR:
acyn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ORV05_25220 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ORV05_25220 (mutM)
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ORV05_25220 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
WAL64258
LinkDB
All DBs
Position
complement(5279053..5279913)
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRAGLQAHVAGRVITRVEVLHPRAIRRHAAGSEDFAGRLAGARVDAARRRG
KYLWLDLSGTEALLAHLGMSGQMLVQPEGAPDEKHLRVRVRFADGGPELRFVDQRTFGGL
ALADLVDTGGTLVPAPIAHIARDPMDPAFDPAAAVRALRSRRTEVKRALLDQTLVSGVGN
IYADEALWRARLHWSRPTAKLTAVQGAALLAAATEVMSEALRAGGTSFDALYVNVNGQSG
YFDRSLNVYGQAERPCARCGTPIRREPFMNRSSYFCPRCQPRPRVA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaacttcccgaggtcgaggtggtccgcgccggattgcaggcgcatgtggcgggc
cgggtcatcaccagggtcgaggtgctgcatccgcgggcgatccgccggcatgcggccgga
tccgaggatttcgccggacggctggccggcgcgagggtggacgcggcgcggcggcgcggc
aagtacctgtggctggacctgtccggcaccgaggcgctcctcgctcacctgggcatgagc
gggcagatgctggtccagccggagggggcgccggacgagaagcatctgcgggtgcgcgtg
cggttcgccgacggcggaccggaactgcgtttcgtcgatcagcgcaccttcggcgggctg
gcgctggccgatctggtggacacgggcggcacactggtgcccgcgccgatcgcgcacatc
gcccgcgacccgatggacccggccttcgatccggccgccgcggtgcgggcgctgcgttcg
cggcgcaccgaggtcaagcgagcgctgctcgaccagaccctggtctccggggtcggcaac
atctatgccgacgaggcgctgtggcgggcccggctgcactggtcgcgcccgacggcgaag
ctcaccgcggtgcagggggcggcgctgctggccgcggccaccgaagtgatgtccgaggcg
ctgcgcgcgggcggcacctccttcgatgccctctacgtcaacgtgaacggccagtcgggc
tacttcgaccgttccctcaacgtctacggccaggccgagcggccctgtgcccgctgcggc
acgccgatccgccgcgagccgttcatgaaccgctcgtcctacttctgcccgcgatgccag
ccccggccgcgcgtggcctga
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