Amycolatopsis cynarae: ORV05_25370
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Entry
ORV05_25370 CDS
T09969
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
acyn
Amycolatopsis cynarae
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyn03032
]
ORV05_25370
03036 Chromosome and associated proteins [BR:
acyn03036
]
ORV05_25370
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_25370
DNA replication proteins [BR:
acyn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ORV05_25370
Chromosome and associated proteins [BR:
acyn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ORV05_25370
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ORV05_25370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
WAL64283
LinkDB
All DBs
Position
complement(5311176..5311790)
Genome browser
AA seq
204 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVISGAKKLPKATAVKRATTTTRAAAGTTATRGT
TTRATSTRATATRPTATRTTTATRTRATAAAATKAAPKATAAKATTAKKTTAAKAAPKAT
AAKAATTTKTAAKKTTAAATRKKK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctctccgagcgtttgggcgacaagaaggtt
gcgtcggaggccgtcgacggtcttgtcgacatcatcatccgtacggtcaacaagggcgag
aaggtgaacatcaccggcttcggtgtgttcgagaagcgcgcccgtgcggcccggaccgcg
cgcaacccccgcaccggtgagaccgtgcgggtgaagaagacgaacgtccccgcgttccgc
gccggcacgacgttcaaggatgtcatcagcggcgcgaagaagctgccgaaggccaccgcg
gtcaagcgtgccaccaccacgacccgcgccgccgccggcaccaccgccacccgcggcacc
accacgcgcgcgacctccacccgcgccaccgcgacccgcccgacggcgacccgcaccacc
accgccacgcgtacgcgggccaccgctgccgccgccaccaaggcggcgccgaaggcgacc
gcggccaaggccaccacggccaagaagacgaccgccgccaaggcggcgccgaaggccacc
gcggccaaggcggccaccaccacgaagaccgcggcgaagaagaccaccgcggccgccacc
cggaagaagaagtag
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