Amycolatopsis cynarae: ORV05_26860
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Entry
ORV05_26860 CDS
T09969
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acyn
Amycolatopsis cynarae
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyn03032
]
ORV05_26860
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_26860
Enzymes [BR:
acyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ORV05_26860
DNA replication proteins [BR:
acyn03032
]
Prokaryotic type
DNA Topoisomerases
ORV05_26860
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ORV05_26860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WAL64557
LinkDB
All DBs
Position
complement(5604923..5606980)
Genome browser
AA seq
685 aa
AA seq
DB search
MTASAEPLYGADDLTHLEGLEAVRKRPGMYIGSTDSRGINHLFSEIVDNSTDEGVAGHAT
RVVVTLHADGSVQVDDDGRGIPTGRHAKSGLSGVELVLTRLHAGGKFGGSGYKTSGGLHG
VGASAVNALSHRFDVTVKQTGKVHEMSFAHGVPGVFDGPGPKAKFSPQAGLRVTGRMKRG
ERTGTSIRYWYDARYFEAGAKLDTEAVRTKLRNTAFLVPGVTYVLRDATEGSIGEETFHF
PNGLKDMVEYLSPGGEKPVSGTLLITGTGTYKENAADENGVMRSNVERHAEVEVALRWGT
GYERTVECFTNTIRNLHGGTHRRGFDRGATKALQEAISKTRGLLKPKEELPTSEDVLEGM
TAVIHVRIPEPQFTSQTKDELSTAGITRVIQGIVERQLKAWTEDRKTKAEAKVVLQKVVD
AARVRLTQKQQKDAARRKTALEGASMPPKLVDCRTTGISRSELFLVEGDSALGSARMARV
SEYQALLPLRGKILNVQKASLGDTLKNAEIASIVQVLGAGTGRTFDLSAMRYGRVILMAD
ADVDGSHIRTLLITLFARYMRPVIEDGRLYAAMPPLHKITTRGRNPETHFTFTQREMEAK
VAELERAGKQIVTPVPRFKGLGEMDADELWETTMNPATRSVRRITFDDAEAAEAALELLM
GEKVEPRRNWLVASAARVDQAAIDI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcttcagctgagcccctgtacggggccgacgacctcacccacctcgaggggctg
gaagccgttcggaagcgacccggcatgtacatcgggtccaccgacagccgcgggatcaac
cacctgttcagcgagatcgtggacaactcgaccgacgagggtgtcgccggtcacgccacc
cgtgtcgtggtgacgctgcacgccgacggcagcgtccaggtcgacgacgacggccgcggc
atccccaccggccggcacgccaagtccggcctgtccggggtggaactggtgctgacccgg
ctgcacgcgggcggcaagttcggcggctcgggctacaagacctcgggcggcctgcacggc
gtcggcgcctccgcggtgaacgcgctgtcccaccggttcgacgtcaccgtcaagcagacg
ggcaaggtgcacgagatgtccttcgcgcacggtgtgcccggcgtgttcgacggtccgggc
ccgaaggcgaagttctcgccgcaggccgggttgcgcgtgaccggcaggatgaagcgcggc
gagcgcaccggcacctcgatccgctactggtacgacgcgcggtacttcgaggcgggcgcc
aaactggacaccgaagcggtgcgcacgaagctgcgcaacaccgcgttcctggtgccgggc
gtcacctacgtgctgcgggacgccaccgagggctcgatcggcgaggagaccttccacttc
cccaacgggctcaaggacatggtggagtacctcagccccggcggggagaagccggtctcc
ggcaccctgctgatcacgggcacgggcacctacaaggagaacgccgccgacgagaacggc
gtgatgaggtccaatgtggagcgtcacgccgaggtcgaggtggcgctgcggtggggtacc
ggctacgagcgcacggtcgagtgcttcaccaacaccattcgcaacctgcacggcggcacg
caccgccgcggtttcgaccgcggcgcgacgaaggccctgcaggaggccatttccaagacg
cggggcctgctgaagccgaaggaggaactgccgacctccgaagacgtgctggagggcatg
accgcggtcatccacgtgcgcattccggagccgcagttcacctcgcagaccaaggacgag
ctgtccaccgccgggatcacgcgggtgatccagggcatcgtggagcggcagctcaaggcc
tggaccgaggaccgcaagaccaaggccgaggcgaaggtcgtgctgcagaaggtggtcgac
gcggcgcgcgtgcggctgacccagaagcagcagaaggacgccgcccgccgcaagaccgca
ctcgagggcgcctcgatgcccccgaagctggtggactgccgcaccaccggcatctcccgc
agcgaactgttcctcgtggagggagacagcgcgctcggttcggcgcggatggcgcgcgtc
tcggagtaccaggccctgctgccgctgcgcggcaagatcctcaacgtgcagaaggccagc
ctcggcgacacgctgaagaacgccgagatcgcctcgatcgtgcaggtgctcggggcgggc
accgggcggaccttcgacctgtcggcgatgcgctacggccgggtgatcctgatggccgac
gccgacgtcgacggttcgcacatccggaccctgctgatcaccctgttcgcccgctacatg
cgcccggtgatcgaggacggcaggctctacgcggccatgccgccgctgcacaagatcacc
accaggggccgcaacccggagacccatttcaccttcacccagcgggaaatggaggcgaag
gtggccgagctggagcgcgcgggcaagcagatcgtcaccccggttccccgcttcaagggc
ctcggcgagatggacgccgacgagctgtgggagaccaccatgaaccccgcgacccggtcc
gtccggcgcatcaccttcgatgacgccgaggcggccgaagccgcactcgaactgctgatg
ggcgagaaggtcgaaccccggcgcaactggctggtcgcctcggccgcccgggtcgaccag
gccgcgatcgacatctga
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