Amycolatopsis cynarae: ORV05_26990
Help
Entry
ORV05_26990 CDS
T09969
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
acyn
Amycolatopsis cynarae
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyn03000
]
ORV05_26990
Transcription factors [BR:
acyn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ORV05_26990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
Crp
Trp_repressor
HTH_38
HTH_3
HTH_23
Xre-like-HTH
HTH_Tnp_ISL3
HTH_Crp_2
Sigma70_r4_2
TetR_N
Motif
Other DBs
NCBI-ProteinID:
WAL64583
LinkDB
All DBs
Position
5633707..5634756
Genome browser
AA seq
349 aa
AA seq
DB search
MTTSREIAQLCGVSVATVSRVFNQPSTVSRQTRERVERVARELDYRPNESARALASKRST
LVGLVWDTDHRRPGWRHPFLQDLLLGLKSALSAHGYHLLMLATSGAETGSANLPAVGASL
ADPVAYVNMTRRHHLGGLILIDSGSDAAAFAAFAQSGIPCVALDVAIEGPRATYVTSDNT
DGAEQAVRHLIAGGHRRIATITGPPDNQPAIDRLAGYRRAMAEAGLPVPEEYVAEGDFYR
ASGQAAMRRLLALGEPPTAVFAAGDEMAVGALLTAREAGLRVPGDVALAGFDDIEIAALV
DPALTTVAQDKAGFGVAAAEAMLAMINGSGGDTPAPRRLPTRLVVRSST
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagccgggagatagcgcagctgtgcggggtgtccgtggccaccgtgtcccgc
gttttcaaccagccgtccacggtcagcaggcaaacccgggaacgggtggagcgggtggcc
agggaactggactaccggccgaacgagtcggcacgggcgctggcgtcgaaacggtccact
ttggtcggtctggtctgggacaccgaccaccgcaggccgggctggcgccaccccttcctg
caggacctgctgctggggctgaaatcggcgctgtccgcgcacggctaccacctgctgatg
ctggccaccagcggcgcggagactggttcggcgaacctgcccgcggtgggcgcctcgctg
gccgacccggtcgcctacgtcaacatgacgcggcgccaccatctcggcgggctcatcctg
atcgacagcggctccgacgcggccgccttcgccgctttcgcccagtccggcatcccctgc
gtggccctcgatgtcgcgatcgaggggccgcgcgcgacctacgtgacctccgacaacacc
gatggcgccgagcaggccgtgcgccacctgatcgccggggggcatcgccgcatcgccacc
atcaccggcccgcccgacaaccagcccgcgatcgaccggctcgccggctaccggcgggcg
atggccgaagcgggcctgcccgtacccgaggagtacgtggcggagggcgatttctaccgg
gcgagcggccaggccgcgatgcggcgcctgctggccctcggcgaaccacccacggcggtc
ttcgccgcgggcgacgagatggccgtgggcgccctgctcacggccagggaagccggtctg
cgggtccccggggacgtcgcgctcgccgggttcgacgacatcgagatcgccgcgctggtc
gatcccgcgctgaccacggtcgcgcaggacaaggccggtttcggcgtcgcggccgccgaa
gcgatgctcgccatgatcaacggctccggcggcgacaccccggccccccgccgcctcccc
acccgcctggtcgtccgctcctccacgtga
DBGET
integrated database retrieval system
