Amycolatopsis cynarae: ORV05_28895
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Entry
ORV05_28895 CDS
T09969
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn00521
Streptomycin biosynthesis
acyn00523
Polyketide sugar unit biosynthesis
acyn00525
Acarbose and validamycin biosynthesis
acyn00541
Biosynthesis of various nucleotide sugars
acyn01055
Biosynthesis of vancomycin group antibiotics
acyn01100
Metabolic pathways
acyn01110
Biosynthesis of secondary metabolites
acyn01250
Biosynthesis of nucleotide sugars
Module
acyn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ORV05_28895 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ORV05_28895 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ORV05_28895 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ORV05_28895 (rfbB)
00525 Acarbose and validamycin biosynthesis
ORV05_28895 (rfbB)
Enzymes [BR:
acyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ORV05_28895 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
WAL64915
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Position
complement(6013026..6014018)
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AA seq
330 aa
AA seq
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MRVLVTGGAGFIGSNYVRRALAGEYPALAGAEIVVLDKLTYAGCEANLAPVADDPRLRFV
RGDICDAALVTEVMAGVDLVVHFAAESHVDRSILGAADFVLTNVLGTQTLLQAALSAGVG
KFVHVSTDEVYGSIAEGSWAEDHVLEPNSPYSASKASSDLLARAFHRTHGLPVCITRCSN
NYGPYQFPEKVIPLFVTNLLDGLTVPLYGDGLNVRDWLHVDDHCRGIQLVADGGRPGEIY
NIGGGTELTNRDLTGRLLDALGADWDRVEPVTDRKGHDRRYSVDITKISTELGYRARVPF
DEGLAETVRWYRENRTWWEPLKNRAALAGK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgctggtgaccggtggtgccggtttcatcgggtcgaactatgtgcgcagggca
ctggccggtgagtatcccgcgctggccggggccgagatcgtcgtgctggacaagctgacc
tacgccggctgcgaggcgaacctcgcgccggtggcggacgatccccggctccgtttcgtg
cgcggtgacatctgcgacgccgcgctggtcaccgaggtgatggccggtgtcgatctcgtg
gtgcacttcgccgcggagtcccatgtggatcgctcgattctcggcgccgcggatttcgtg
ctgacgaacgtcctgggcacgcagaccctgctgcaggccgcgctgtccgccggggtcggc
aagttcgtccacgtgtccacggacgaggtgtacggctcgatcgcggagggttcctgggcc
gaggatcacgtgctcgagccgaattcgccctactcggcgtcgaaggcttcgtcggatctg
ctggccagggcgttccaccgcacgcacggactgcccgtctgcatcacccggtgttccaac
aactacggtccgtatcagttcccggaaaaagtcatcccgctgttcgtcacgaacctgctc
gacgggctgaccgttccgctgtacggcgatgggctgaacgtccgtgactggttgcacgtg
gacgaccactgccgcggtatccagctggtcgccgacgggggcaggccgggggagatctac
aacatcggtggcggcaccgagctcaccaaccgggacctgaccgggcggttgctggacgcg
ctcggcgcggactgggaccgggtggagccggtcaccgaccgcaaggggcacgaccgccgg
tactccgtggacatcaccaagatcagcactgagctggggtaccgggcgcgggtgccgttc
gacgaggggctggccgaaacggtgcgctggtaccgggaaaaccgcacgtggtgggaaccg
ctcaagaaccgtgccgcactcgcggggaagtga
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