Amycolatopsis cynarae: ORV05_30100
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Entry
ORV05_30100 CDS
T09969
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acyn
Amycolatopsis cynarae
Pathway
acyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ORV05_30100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyn03021
]
ORV05_30100
03400 DNA repair and recombination proteins [BR:
acyn03400
]
ORV05_30100
Enzymes [BR:
acyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ORV05_30100
Transcription machinery [BR:
acyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ORV05_30100
DNA repair and recombination proteins [BR:
acyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ORV05_30100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WAL65124
LinkDB
All DBs
Position
complement(6266344..6267405)
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPALGEEPINETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPAGVTVHN
PDLHIASLNGKGKLEIELVVERGRGYVPALQNKQAGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKLK
LVGLGLSLKDSPPGFDPTAAAASYEGEGWSEGVDTISDAGHDDGQDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatttcccagcgaccggccctcggcgaggagccgatcaacgaaacccggtcccgg
ttcaccatcgagccgctggagcccggcttcgggtacacgctcggcaactcgctgcggcgc
acgctgctgtcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtcccgggggtgaaggaagacgtcaccgacatcatcctgaacctc
aaggaactggtcgtgtcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggccccggtgaggtcaccgcggccgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgatctgcacatcgcctcgctgaacggcaagggcaagctggagatcgagctggtcgtc
gagcgcggccgcggttacgtgcccgccctgcagaacaagcaggcgggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctggacgtggagaccaagccg
tcgatcacgccccgggacgccgtcgcgtcggcaggcaagacgctggtcgagctgttcggt
ctcgcccgcgagctgaacgtcgacgccgaaggcatcgagatcggcccgtcgccgcaggag
gcggacaccatcgccgcctacgcgatgccgatcgaggacctcgacctgaccgtccggtcg
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcgtctcccgcagcgag
gcggacctgctcgacatccgcaacttcggtgccaagtcgatcgacgaggtcaagctgaag
ctggtcggtctgggtctttcgctcaaggacagcccgcccgggttcgacccgacggccgcc
gccgccagctacgagggcgaaggctggtccgagggcgtcgacactatttcggacgctggc
cacgacgacggccaggactacgcagagacggagcagttgtag
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