Amycolatopsis cynarae: ORV05_31535
Help
Entry
ORV05_31535 CDS
T09969
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
acyn
Amycolatopsis cynarae
Brite
KEGG Orthology (KO) [BR:
acyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyn03021
]
ORV05_31535
Transcription machinery [BR:
acyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ORV05_31535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_24
MarR_2
KORA
MarR
HTH_Tnp_4
HTH_IclR
HTH_31
NirdL-like_HTH
Sigma70_ECF
DUF7343
HTH_26
Trp_repressor
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
WAL65377
LinkDB
All DBs
Position
6525542..6526354
Genome browser
AA seq
270 aa
AA seq
DB search
MTGSRAEPAQPTSSNEYEHLSPLFDELAALDENDPRRAELRDELVTGHLPLAEHIAQRFS
GRGVAKEDLVQVATVGLINAVDRFDPTRGSDFLSFAVPTVMGEVRRHFRDTGWLVRVPRR
LKELHLSISSANTELAQRLGRAPTPSEIATHLGITQDEVLEGLEAGNAYHSMSLDEVLSG
DTENLALGDTLGEEDAALEGVENHEALLPLIQELPERERKILGLRFVHNMTQTQIAERIG
VSQMHVSRLLARTLERLREGLTEQDDADPR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggctcccgagccgaaccagcacagcccacgtcgtcgaacgagtacgagcacctc
agcccgctgttcgatgagctcgccgccctcgacgaaaacgatccccggcgggccgagctc
cgggacgagctggtgaccgggcacctgccgctggccgagcacatcgcccagcgcttctcc
ggccgcggcgtggccaaggaagacctggtccaggtggccacggtcgggctgatcaacgcc
gtggaccggttcgaccccacccggggctcggacttcctgtccttcgcggtgccgaccgtg
atgggcgaggtgcggcggcacttccgggacaccggctggctggtgcgggtcccgcggcgg
ctcaaggagctgcacctgtcgatctccagcgcgaacaccgaactcgcgcagcggctcggg
cgggccccgacccccagcgagatcgccacgcacctcggcatcacgcaggacgaggtgctc
gagggcctggaggcgggcaacgcctaccactcgatgtcgctggacgaagtgctgtccggg
gacaccgagaacctcgcgctgggcgacacgctgggtgaggaggacgccgcgctggaaggg
gtggaaaaccacgaagcgctgctgccgctgatccaggaactgcccgagcgggaacgcaag
atcctggggctgcggttcgtgcacaacatgacgcagacccagatcgcggagcggatcggc
gtgtcccagatgcacgtgtcccggctactcgcccgcaccctggagcggctccgcgaaggc
ctcaccgagcaggacgacgccgacccccgctag
DBGET
integrated database retrieval system
