Acidithiobacillus caldus ATCC 51756: Acaty_c0340
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Entry
Acaty_c0340 CDS
T03561
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03410
Base excision repair
acz03430
Mismatch repair
acz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acaty_c0340
03430 Mismatch repair
Acaty_c0340
03440 Homologous recombination
Acaty_c0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acz03400
]
Acaty_c0340
DNA repair and recombination proteins [BR:
acz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Acaty_c0340
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Acaty_c0340
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Acaty_c0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIA54230
UniProt:
A0A059ZRD5
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All DBs
Position
351016..352749
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AA seq
577 aa
AA seq
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MSRWQQRPLLAPEILAEAKRVALDPVLARLYAARAVRETRQLRLDVEQLSPGEGDQGLLG
LGAAAELLADAVRQQRVVCIVGDYDCDGATATALLHEALSLCGARALRYVVPDRFRWGYG
LTPELVAQLPADTEIVVTVDNGITSVDGVAAAKARNLQVIITDHHLPGAVLPAADAIVNP
RQPGCPFPWKSSSGVAVAFYLAAAVRRRLLDRGYLGAGAPHFGQLWDLVALGTVADVVAL
EHNNRILVQQGLKRLRSGRARPGLAALLECAGVEPAAVTAATLGFTLAPRINAAGRLEDM
GLGIRLLLSQDRAEAAELARTLDELNRQRRAIETQMSEAAQQIVDDLPDCGHNLGLCVFQ
PEWHAGVIGIVAGRLRERYHRPAIAFAPVGDGFLQGSGRSIAGLHLRDSLADCVARAPHL
LERFGGHAAAAGLRLRRAHLDEFVALWNTVLAERLTTEDLEESVFHDGPLESSSLDLELA
RRLEAAGPWGNGFPEPLFWGRFRICERKALPGGHWRLHLDDGAGRRFEAIRFRSPELPPG
PWVEALYVPEVNRYAGTERLQLRLHALRNGEENGRTQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggtggcagcagcggcccctgcttgccccagaaatccttgctgaggccaaacgc
gtggcgctggatccggtgctcgctcgcctctacgccgcgcgcgccgtgcgcgaaacacgg
cagttgcggctcgatgtggagcagctgagtcccggtgagggggatcagggcctcctggga
ctgggtgcggcggcggagctcctggcggacgccgtgcggcagcagcgcgtggtctgcatc
gtcggcgattacgactgcgatggcgccacggccacggccctcctccatgaagccctcagt
ctctgtggtgcccgtgccctgcgttatgtcgtgcccgatcgttttcgctggggttacggc
ctgaccccggaactggtggcacagctccccgccgatacggagatcgtggtgaccgtggac
aacggtatcaccagtgtcgatggcgtggccgcagccaaggcccgcaacctgcaggtgatc
atcaccgatcaccacctcccgggcgccgttctgccggccgccgacgccattgtcaatccg
cgccaacccggttgtcccttcccctggaaaagcagctcgggggtggccgtggccttttac
ctggcggcagccgtgcgccggcgcctgctggatcgcggctatctcggcgcaggtgcgccg
cactttggccagctctgggatctggtggccctgggtacggtggccgacgtggtggctttg
gaacacaacaaccgtattctcgtgcagcagggcctcaagcgtctgcgcagtgggcgggcg
cgccccggccttgcggccctgctcgagtgcgccggtgtcgaaccggccgccgtgacagcg
gccaccctgggttttaccctggcgccgcggatcaacgcggcggggcgtctcgaggacatg
ggcctgggcatccgcctgctgctcagccaggatcgtgccgaagccgcggaactcgcccgt
accctggacgagctcaaccgccagcgacgtgccatcgaaacgcagatgagcgaagcggcg
cagcaaatcgtggacgatctgccggactgcgggcataatcttggcctttgtgtttttcag
ccggaatggcatgccggggtcatcggcatcgtcgccggtcgattgcgggaacgctaccac
cgcccggccattgccttcgcgccggtgggcgatggttttctgcagggctccggcaggtcc
atagcgggtctgcatctgcgcgacagtctggccgactgtgtcgcgcgcgccccgcacctc
ctggaacggttcggcgggcatgcggcggcggcgggcctgcgcctgcgccgtgcgcatctg
gacgagttcgtggcgctgtggaacaccgttctggcggagcgtctcacgaccgaggatctg
gaggagagcgtcttccacgacggaccgctggagagttccagcctggacctcgagttggcc
cggcgtctggaggcggcggggccttggggtaatggtttcccggaaccccttttttgggga
cggtttcgtatttgcgagcgcaaggccttgcccggtggccattggcgtctacatctggac
gatggtgccgggcgccgtttcgaggcgatccgctttcgcagccccgaactaccgcccggc
ccctgggtggaggccctctacgttccggaggtcaatcggtatgctggtacggagcgcctg
cagctgcgcctgcacgctctgcgtaatggagaggaaaatggcagaactcaatga
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