Acidithiobacillus caldus ATCC 51756: Acaty_c0523
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Entry
Acaty_c0523 CDS
T03561
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acaty_c0523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acz03019
]
Acaty_c0523
03009 Ribosome biogenesis [BR:
acz03009
]
Acaty_c0523
Enzymes [BR:
acz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Acaty_c0523
Messenger RNA biogenesis [BR:
acz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Acaty_c0523
Ribosome biogenesis [BR:
acz03009
]
Prokaryotic type
rRNA helicases
Acaty_c0523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIA54408
UniProt:
A0A059ZSB6
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All DBs
Position
528587..530434
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AA seq
615 aa
AA seq
DB search
MFFMGTETALSFSDFALAEPLQRAVREIGYEQPSPIQAQSIPPLLAGRDVIGLAQTGTGK
TAAFALPLLSRVDLSLRFPQILVLAPTRELAIQVAEAMQSYAKFLPGFHVLPIYGGQSMG
LQLKQLQRGVQVVVGTPGRIQDHLRRETLKLDRLQAVVLDEADEMLRMGFIDAVEEILKH
TPTQRQVALFSATMPEAIRRIARTYLRDPLEIRIKSTTSTVAAIRQRYWLVSGTHKLDAL
TRILEVEDSNAWIIFVRTKTATVELAERLEARGYACGALNGDMTQAMREQTIERVKSGSL
DIVVATDVAARGLDVERITHVINYDIPNDTEAYVHRIGRTGRAGRKGEAILFVAPRERYL
LKAIERATGQPIEPMHLPSLEDVADRRTSQFKEQLTTVLETEDLDRFASLVAEYQSEQEV
SLERIAAALAFLAQRDRPLVPDAPPAVPSLDKAPGPRGARRLEERKERAPRERAAAGENR
PDDTPMILYRLAVGESHGAQVKNIVGAIANESGLPSRLIRKVQVHDDYSTVELPADLDRG
ILEHLQKVWVAGRPLQIAVVGTAERARTSSTRRSVSPKADARPVLSVRKSTPEDGRTDGR
EVKKPSRRKQERDKR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttcatgggtaccgagactgcgctgagtttttccgattttgccttggccgagccc
ctgcagcgggcagtgcgagagattggctacgagcaaccctctcccatccaggcgcagagc
attccgccgctcctggctgggcgcgatgtcatcggccttgcccagaccggcaccggcaag
actgccgcctttgcgctgccgctcctcagccgggtggatctgtccctgcgcttccctcag
attctggtgctggcccccacgcgcgagctggccatccaggttgccgaggccatgcagagc
tacgccaagtttctgcccggttttcacgtcctgcccatctacggcggtcagtccatgggt
ctgcagctcaagcagctgcagcgcggagtgcaggtggtcgtgggcacacccgggcgtatt
caggaccatctgcgccgtgagactttgaagctcgatcgcctgcaggcggtggttctcgat
gaggccgacgaaatgttgcgcatgggcttcatcgacgccgtggaggagatcctcaaacac
acgccgacgcagcgccaggtggcccttttttcggccaccatgcccgaggccatccgccgc
atcgcccgtacctacctgcgcgaccctctggaaatccgcatcaagagtaccaccagcacc
gtggcagccattcgccagcgctactggctggtgagcggtacccacaagctcgatgccctt
acccgtattctcgaggtggaggacagcaacgcctggatcatttttgtgcggaccaaaacc
gccacggtagagctggcggaacgcctcgaggcgcgcggttatgcctgcggtgccctcaat
ggcgacatgacccaggccatgcgcgagcagaccatcgagcgggtcaaatccggtagcctc
gatatcgtcgtcgccaccgatgtggccgcccgcggactggatgtggagcggatcacccac
gtcatcaactacgatattcccaacgatacggaagcctacgtccaccgcatcggacgcacg
gggcgtgccgggcgcaagggtgaagccattctcttcgtggcgccgcgcgagcgttacctc
ttgaaggccatcgaaagggccacgggccagcccatcgagcccatgcatctgccgagtctg
gaggacgtggcggatcggcgcacgagccagttcaaggaacaactgaccaccgtcctggaa
acggaagacctggatcgcttcgcgtccctggtggcggaataccagagcgagcaggaggta
tccttggagcgcattgccgccgccctcgcttttctggcccagcgcgacaggccgctggtg
cccgatgcgccgcccgccgtaccgagtctcgacaaggcccctggcccgcgtggtgcgcgt
cgcctggaagagcgcaaggaaagggcacccagagagcgggctgcggcgggagaaaaccgt
ccagacgatacgcccatgatcctctatcgccttgccgtgggggagagccatggggcgcag
gtcaagaacatcgtcggcgccattgccaatgaatcgggactgcccagtcgcctgatccgc
aaggtccaggtacacgacgattacagcacggttgagctaccggcggacttggatcgcggt
attctggagcacttgcagaaggtctgggtggcgggacgtcctctgcagattgccgtcgtc
ggtacggcggagcgggcacggacctcgtcgaccaggcgcagcgttagcccaaaggccgat
gcaagacccgtgttgtcggtgcgcaagagcacccctgaagatggcaggacggacggcagg
gaggtcaaaaaaccttcgcggcgcaagcaggagcgggacaagcgctga
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