Acidithiobacillus caldus ATCC 51756: Acaty_c0611
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Entry
Acaty_c0611 CDS
T03561
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Acaty_c0611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acz03021
]
Acaty_c0611
03400 DNA repair and recombination proteins [BR:
acz03400
]
Acaty_c0611
Enzymes [BR:
acz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Acaty_c0611
Transcription machinery [BR:
acz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Acaty_c0611
DNA repair and recombination proteins [BR:
acz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Acaty_c0611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
7TMR-HDED
DUF7717
Motif
Other DBs
NCBI-ProteinID:
AIA54491
UniProt:
A0A059ZWX7
LinkDB
All DBs
Position
609997..614085
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSFTEKKRIRKDFGKSQSILQVPYLLATQMDSYRDFLQADVPAAARKEVGLQEVFRSL
FPMESYSGNASLDFVSYRLEKPVFDVVECRQRGLTYCAGLRVRLRLALYEKDDSTGAKRI
KDVKEQDVYMGELPLMTDHGAFVINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLFNA
RIIPYRGSWLDFEFDPKDHIYARIDRRRKLPATTLLRALGYSTEDILAMFFETDTFRIDG
KRIFYHLIPQRLQGETAVFDIVHPKTGEVVVAAGKRVTARHVRQLSELGGEQEVEVPEAF
LLGKVLAQDLVDEATGEVIVAANEALDAEILARLYALPARSLRTLYTNELDRGAYISETL
RIDTARDAHEAQLEIYRLMRPGEPPSKDAAQNLFQGLFFSPDRYDLSAVGRMKFNRRVGR
EEITGPGVLSNEDIIDVLKVLVALRNGQGDIDDIDHLGNRRVRSVGELMENQFRLGLVRV
ERAVKDRLALAESEGLTPQDLINAKPIAAVVNEFFGSSQLSQFMDQTNPLSEVTHKRRVS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSCYARTNAYGFLETPY
RRVIAGRATDEVVYLSAIDEGNYVIAQANSTLDDDNRLVDELVSCRHRNETVLANPDQVQ
FMDISPRQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTVRSQAPLVGTGMERVVAID
SGAAIKAVRGGVVDSVDGARIVVRVNDEETLPGEPGVDIYNLVKYARSNQNTTLNQRPIV
KVGDVVARGDVLADGPSTEMGELALGQNILVAFMPWNGYNFEDSILISERVVAEDRYTTI
HIEEFSVFARDTKLGPEEITRDIPNVAEGALRHLDESGIVVIGAELAPGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKASDVKDNSMRMPAGMYGTVIDVQVFTRDGIEKDARAKAIEEE
QLRKIRKDVHDEYRIFEQDSFQRIERLLLNKVAEGGPNGLAAGAKITKAYLKDLPRSQWF
DIRLRSEESNAALEQIRAQLEQQRERLDAVLEEKRRKLTQGDDLSPGVLKMVKVHVAVKR
QLQPGDKMAGRHGNKGVVSKIVPVEDMPYLADGTPVDIVLNPLGVPSRMNVGQILETHLG
WAAKGLGRRIEEMLENQRQVSEIRAFLKEIYNRAGKKEDLDQLNDEDILELARNLRGGVP
MATPVFDGASEEEIRDMLELAGLPRSGQVTLYDGRSGEAFDRPVTVGYMYMLKLHHLVDD
KMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGR
SKMYESIVKGDFRMDAGMPESFNVLLKELRSLAIDIELEQSN
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcctattcttttactgaaaagaaacggattcgtaaagactttggcaagagccagagc
attctgcaggtgccctatctgttggctacccagatggattcgtatcgggattttctgcaa
gccgacgtgccggcggctgcgcgcaaggaggtcggactgcaagaggttttccgttcgctc
ttccccatggagagctactctggcaatgccagtctggactttgtgtcctatcgcctggaa
aaaccggtgtttgatgtggtggagtgccgtcagcggggcctgacctactgtgcgggcctg
cgcgtgcggctgcgcctggcactctacgagaaggacgacagcactggtgccaagcgcatc
aaggacgtcaaggaacaggacgtctacatgggcgaacttcccctcatgaccgaccacggt
gcctttgtcatcaacggcacggaacgggtcatcgtgtcgcagttgcaccgttctcccggc
gttttcttcgaccacgatcgcggtaagacccactcttcgggcaagctgctcttcaacgcg
cggatcatcccctatcgcggttcctggctcgactttgagtttgatcccaaggatcacatc
tatgcccgtatcgaccggcggcgtaagttgccggccaccacgctgctgcgcgccttgggc
tatagcaccgaagacattctggcgatgttcttcgagacggacaccttccgcatcgacggc
aagcgtatcttctatcacctgatcccccagcgtttgcagggcgagacggcggttttcgat
atcgtccatcccaagaccggtgaagtggtggtggcggcgggcaagcgcgtgacagcgcgt
catgtgcggcagttgagcgagctgggtggggagcaggaggtcgaggttcccgaggccttt
ctcctcggcaaggtgctggcccaggatctggtggatgaggccaccggtgaggtcatcgtg
gcggccaacgaggctctggatgcagaaatcctcgcgcggctctacgctctgccagcccgt
agcctgcgcacactctataccaacgagctggatcgcggcgcctacatctccgaaaccttg
cgcatcgataccgcgcgcgacgcccacgaggcgcagctcgagatctaccggttgatgcgt
cccggtgaaccgccctccaaggacgctgcccagaatctcttccaggggcttttcttcagc
cccgatcgctacgatctctccgccgttggccggatgaagttcaaccggcgggtgggacgg
gaagagatcaccggccccggggtgctgagcaacgaggacatcatcgacgtactcaaggtt
ctggtggccctgcgcaacggtcagggcgacatcgacgacatcgatcacctgggtaaccgt
cgtgtgcgttccgtgggtgaactgatggagaatcagtttcggctgggtctggtgcgcgtc
gaaagggcggtgaaggaccgcctggccctggccgagagtgagggcttgacgccccaggat
ctcatcaacgccaagcccatcgcggcggtggtcaacgagttctttggctccagtcagctg
tcccagttcatggaccagaccaatcccctgtcggaggtgacccataagcgccgcgtatcg
gccctgggaccaggcggtctcacccgcgagcgtgccgggttcgaagtgcgcgacgtgcat
cccacccactatgggcgcatatgtcccatcgaaacgccggaagggcccaacatcggcctg
atcaacagcctttcctgctacgcccggaccaatgcctacggcttcctggagacgccctac
cggcgggtgatcgcaggccgggcgacggacgaggtggtatatctgtcggccatcgatgag
ggcaactacgtcattgcccaggccaacagcaccctggacgacgacaaccgcttggtggat
gagttggtctcctgccgccatcgcaacgaaaccgttctggccaatcccgatcaggtccag
ttcatggacatctcgccgcgtcagatcgtgtcggtggcggcgagcctcatcccctttctg
gagcacgacgacgctaaccgcgcgctcatgggttccaacatgcagcgtcaagcggtaccc
accgtgcgctcccaggcacccttggtgggaacggggatggagcgggtggtggccatcgat
tccggtgccgccatcaaggcggtacggggtggggtggtggacagcgtcgacggtgcgcgt
atcgtagtccgggtcaatgacgaggaaacgctcccgggcgagcctggtgtcgacatctac
aacctggtgaagtatgcccgctccaaccagaacaccaccctcaatcagcgccccatcgtc
aaggtgggggatgtggtggcccgtggtgacgtgctcgccgacggtcccagtacggaaatg
ggagagctggctctggggcagaacatcctggtggcgttcatgccctggaatggctataac
ttcgaggattccatcctgatttccgagcgggtggtggcggaggatcgctacaccaccatt
cacatcgaggaattctccgtctttgcccgcgatacgaagctcggacccgaggagatcacc
cgcgacatccccaacgtcgccgagggcgcgctgcggcatctggacgagtccggcattgtc
gtcatcggtgccgagctcgcgcccggagatatcctcgtgggtaaggtcacgcccaaaggg
gagacccaactgacccccgaggaaaaactcctgcgcgccattttcggtgagaaggcctcg
gacgtgaaggacaactccatgcgcatgccggcggggatgtacggtaccgtcatcgatgtc
caggtgttcacccgcgacggcatcgaaaaggatgcccgggccaaggccatcgaagaagag
cagttgcgtaagatccgcaaggacgtccacgacgagtaccggatcttcgagcaggatagt
tttcagcgcatcgagcgtctgctcctgaacaaggtggcggagggcggtcccaacggcctt
gcggcgggcgccaagatcaccaaggcctacctcaaggacttgcctcgcagtcagtggttc
gacatccgtctgcgcagcgaggagagcaatgcggccctggagcagatccgggcgcagctg
gagcagcaacgggagcgtctggatgcggtgctggaagagaagcggcgcaagttgacccag
ggggatgacctgagccccggtgtgctgaagatggtcaaggtgcacgtggcggtgaagcgt
cagctccagcccggtgacaagatggccgggcgccacggcaacaagggcgtggtatccaag
atcgtgcccgtggaggacatgccctatcttgccgatggtacgccagtagacatcgtcctc
aatcctctgggcgtaccttcccgcatgaacgtcgggcagattctcgagacgcacctgggc
tgggccgccaagggtctgggccggcgcatcgaggaaatgctggaaaaccagcggcaggtg
agcgagatccgcgccttcctgaaggagatctacaaccgcgccggcaagaaggaagacctc
gatcagctcaacgacgaggacatcctcgagctcgcgcgtaatctgcgcggcggtgtgccc
atggctacccccgttttcgacggcgcttcggaagaggaaatccgcgacatgctggagctt
gccgggctgccgcgcagtggccaggtcacgctctacgatggccgcagtggtgaggcgttc
gatcgaccggttaccgtcggctacatgtacatgctgaagcttcaccacctggtagacgac
aagatgcatgcccgctccaccggtccctatagcctggtcacccagcagccgctgggcggc
aaggcgcagtttggtggccagcggtttggcgagatggaggtctgggccctggaggcctac
ggtgcggcctacaccctgcaggagatgctcacggtcaagtccgacgacgtgtccggacgc
agtaagatgtacgagtccatcgtcaagggcgatttccgcatggatgccggcatgcccgag
tccttcaatgtgctcttgaaggagctgcggtcgcttgccatcgacatcgaactggaacag
tccaactaa
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