Acidithiobacillus caldus ATCC 51756: Acaty_c0646
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Entry
Acaty_c0646 CDS
T03561
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Acaty_c0646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acz03021
]
Acaty_c0646
03400 DNA repair and recombination proteins [BR:
acz03400
]
Acaty_c0646
Enzymes [BR:
acz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Acaty_c0646
Transcription machinery [BR:
acz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Acaty_c0646
DNA repair and recombination proteins [BR:
acz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Acaty_c0646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
DUF211
Motif
Other DBs
NCBI-ProteinID:
AIA54526
UniProt:
A0A059ZX11
LinkDB
All DBs
Position
635261..636280
Genome browser
AA seq
339 aa
AA seq
DB search
MSEISDLLRPEHYDLEVLSPRRARISLGPLERGFGHTLGNALRRVLLSSLKGAAVTEVEI
EGVLHEYSSIEGVQEDVVDILLNLKQLAVRAQGRNEVMVTLRKRGPGLVTGADIIAEHGI
EVANPEQVIATLTRDVELVMHLRFDTGRGYEPAATRRQSHEKRIGVLALDASYSPVHRVS
FQVESARVEQRTDLDRLVLDVETNGVVEPLWAVQEAARILRQQLAVFGGAEAATEREAHA
APVHEDLLPLLARPVDDLELTVRSANCLKAEDIFYIGDLVQKTEQELLKAPNLGRKSLTE
IKEVLDKNGLTLGMRIENWPPENLPAVPGRPVVDVGRGG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaatatcggatctgttgcgtccagagcattacgatctcgaagtgctttcgcct
cggcgtgcgcggatatccctggggccgttggagcgtggttttgggcatactctgggtaac
gcgctgcggcgtgtgctgctgtcctcgttgaagggggcggcggtgacggaggtggagatc
gaaggggttcttcacgagtattccagcatcgaaggtgtgcaggaagacgtggtggatatc
ctgctgaacctcaaacaacttgcggtgcgtgcccagggacgcaatgaggtcatggtcacc
ttgcgcaagcgcggtccgggccttgtgacgggcgcggacatcattgccgagcacggcatc
gaggtggcgaatccggagcaagtcattgccaccttgacccgcgacgtggagctggtcatg
catctgcgcttcgatacgggcaggggctacgaaccggcggcgacgcggcggcagagccac
gagaagcggattggcgtgctggcgctggatgcgagttacagtccggtacatcgcgttagt
tttcaggtggaaagcgcccgtgtcgaacagcgcaccgacctcgaccgcctggtgctggat
gtggagaccaacggggtagtggaaccgctgtgggccgttcaggaagcagcccgtatcctg
cggcagcagctggcggtttttggcggcgcagaggcagcaacggagcgggaagcccatgcg
gcgccagtacacgaagacctattgccgctgctggcgcgtccggtggacgacttggaattg
acggtgcgctcggccaattgtctgaaggctgaagatattttctacatcggcgacctggtt
cagaagaccgaacaggaactgctcaaggcacccaaccttggacgcaagtccctgacggaa
atcaaggaagtcttggacaagaacggtttgaccctggggatgcgcatcgagaactggcca
ccagaaaatctacccgccgtgccggggcgtccggtggtggatgtcggtcgtggcggctag
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