Acidithiobacillus caldus ATCC 51756: Acaty_c2140
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Entry
Acaty_c2140 CDS
T03561
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Acaty_c2140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acz03019
]
Acaty_c2140
03009 Ribosome biogenesis [BR:
acz03009
]
Acaty_c2140
03036 Chromosome and associated proteins [BR:
acz03036
]
Acaty_c2140
Enzymes [BR:
acz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Acaty_c2140
Messenger RNA biogenesis [BR:
acz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acaty_c2140
Ribosome biogenesis [BR:
acz03009
]
Eukaryotic type
90S particles
RNase
Acaty_c2140
Prokaryotic type
rRNA processing factors
Acaty_c2140
Chromosome and associated proteins [BR:
acz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Acaty_c2140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AIA55994
UniProt:
A0A059ZT21
LinkDB
All DBs
Position
complement(2201401..2202099)
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AA seq
232 aa
AA seq
DB search
MKSLERLQQAIGYVFQDEVLLRQALTHRSAGAQHNERLEFLGDAALNFVVAAELYARFPK
VSEGNLSRMRARLVREETLAQVAGEIALADSLILGPGELRSGGARRDSIRADALEAIIGA
AYLDGGFAAAQGIVRQLIVPLMTEALGDEELRDPKTRLQEFLQGQGKPLPSYSLVEEKGQ
AHERRFVARCSVQGVPATDAEAGSRRKAEQQAAQQMLEQLQKSPAGQQRHAG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattggaacgattgcaacaggccatcggttatgtgtttcaggacgaggtactc
ctgcgccaggccctcacccaccgcagcgccggcgcccagcacaacgaacgtctggagttt
ctgggcgatgcggccctgaattttgtggtggcggcggagctctacgcccgtttccccaag
gtcagtgagggcaacctgtcgcgcatgcgggcgcgtttggtgcgggaggagaccctggcc
caggtggcgggcgagatcgcgctggccgattccctcattctcggaccgggggagctgcgt
tccgggggcgcgcggcgcgactccatccgcgccgatgccttggaggcgatcatcggtgcg
gcctacctggacggaggctttgccgccgcccaggggatcgtgcgtcagctcatcgtcccc
ctgatgaccgaggccttgggcgacgaggaactgcgcgaccccaagacgcggctgcaagaa
tttcttcagggtcagggtaagcccttgccgagctacagtctggtggaagaaaaaggccag
gcgcacgaacgccgctttgtcgcgcggtgcagcgttcagggggtgcccgccaccgacgcc
gaggccggcagccgccgcaaggctgaacaacaggccgcgcagcagatgctggagcaattg
cagaagtcgcccgcaggtcagcagcggcatgccggctga
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