Acinetobacter sp. 2019-01-05: SC192_06220
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Entry
SC192_06220 CDS
T11468
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aczq Acinetobacter sp. 2019-01-05
Pathway
aczq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aczq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SC192_06220 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aczq03019
]
SC192_06220 (rhlB)
Enzymes [BR:
aczq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SC192_06220 (rhlB)
Messenger RNA biogenesis [BR:
aczq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SC192_06220 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
FACT-Spt16_Nlob
YtzH
Motif
Other DBs
NCBI-ProteinID:
XMB93941
LinkDB
All DBs
Position
1299145..1300296
Genome browser
AA seq
383 aa
AA seq
DB search
MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKFLTKFSNLHVVTLLGGVDFDK
QKKQLDANFVDIIVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SARKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYR
LLQDILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRMKMLEQFKQG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacatctggttttgaaaccttgaatttacatccgcaacttaaaaaggcgattgatgct
ttagggtttactcaaatgaccccaattcagcaaaaggttttaaaatatacattagccggg
catgatgcaattgggcgagcacagacaggaactggtaagacagctgccttcttgattagt
gtaattaatgatttactcaataatccggttcaagagcaacgctttcgtggcgagcctcgt
gctttaatcttagcacctactcgtgagttggcattgcaaattgaaagtgatgcgaaattt
ctcacgaaattctctaatttacatgtcgtgaccctattgggtggtgttgattttgataag
cagaagaagcaactcgatgctaattttgttgatattattgtcgctacacctggacgttta
attgattttgtagaacaaaaagaagtttggctcgatcaaattgaatttttagtcattgat
gaagctgaccgtttattagatatgggctttattccttcggtaaagcgtattgttcgttat
tcagcgcgtaaggaacaacgccaaaccctcatgttttcagcaacatttagctacgatgtt
ttaaatttggcaagacagtggttatttgaacctgtaactgttgaaattgaacctgaacaa
aagaccaataacgatgttgaacaacgtgtttacgttgtggctaaacaagataaatatcgt
cttttacaagatattttgcgcgaagaaccgattgataaggtcatgatctttgccaatcgt
cgtgatcaagtgcgtcgtctttacgatcatttgaaaaaagacgggtataaagtagggatg
ttatctggtgaaattgctcaagataaacgtatgaaaatgttagagcagttcaaacaaggt
aagcataacatcatgattgcaactgatgtggctggccgtggtattcacgtagatggcgta
tctcatgtggtcaacttcactttacctgaacaatctgatgattatgttcatcgtatcgga
cgtacaggtcgtgcaggggcacaaggggtaagtattagtttcttatcggaagatgatgct
ttctatttgccggaaattgaaaaggcaattggtaagaaattaccacttactcgtttagat
ggttattgttaa
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