KEGG   Acinetobacter sp. 2019-01-05: SC192_15330
Entry
SC192_15330       CDS       T11468                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
aczq  Acinetobacter sp. 2019-01-05
Pathway
aczq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aczq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SC192_15330 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aczq03021]
    SC192_15330 (rho)
   03019 Messenger RNA biogenesis [BR:aczq03019]
    SC192_15330 (rho)
Transcription machinery [BR:aczq03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     SC192_15330 (rho)
Messenger RNA biogenesis [BR:aczq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SC192_15330 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Sulfotransfer_1 AAA_22 NACHT AAA_25 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: XMB92231
LinkDB
Position
3221932..3223200
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDKLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaaccaatcggcgaactaattaaaattgctgaattt
atgggccttgaaggtatggctcgtaaccgaaagcaagatattatctttgccatcttgaaa
cgccatgcaatgaatggcgaagaaatttttggtgacggcgttcttgaaattctctctgat
ggttttggttttttgcgctctgccgcaggttcgtatttagctggtccggatgatatttat
gtgagtccttcacaaatccgacgctttaacttgcgtacaggtgacaccatcacaggtact
attcgccctccgaaagaaggtgaacgttattttgctttgctcaaagttaatcaaattaac
tatgacacaccagaaaattcacgtaataaaatcttatttgaaaacttaactcctcttttc
ccaaccgaacaactggtaatggaattaggtaatggtacaacagaagatttgactgcacgt
gtagtcgacttagttgcaccaatcggtaaaggtcaacgttctattattgttgcaccgcca
aaagcgggtaaaacaatgttacttcaaaacattgctcaatcaattgtcagaaacaatccg
gaagttttccttattgttttactcattgatgagcgtccagaagaagtaactgaaatggaa
cgtacagtacgtggtgaagttgttgcttcaacatttgatgaagcgcctgcgcgtcacgta
caagttgccgaaatggttattgaaaaagctaaacgtctagttgaacataaaaaagacgtt
gtaatcttgcttgactctattacccgtctagctcgtgcatacaacactgtgattccttca
tcaggtaaggtattaacaggtggtgtagatgcacacgcattagaacgtccaaaacgtttc
tttggtgctgctcgtaacatcgaagaaggcggttctttaacaatcatttctactgcgctt
attgaaactggcagtaaaatggatgacgtaatttacgaagaattcaaaggtacaggtaac
caagaaattacacttgatcgccgtattgctgagaagcgtgtcttccctgccatgaatatt
aagaaatcaggcacacgtcgtgaagaacgtttaatggatgaagataaattacgcaaagtc
tggatccttcgcaaacttcttcaccctatggatgaattggctgctatggaattcttactt
gaccgtatgaaagaaaccaaaacaaatgatgatttctttgatcagatgaaacgtaaagct
tcaacttaa

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