Acinetobacter sp. 2019-01-05: SC192_16620
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Entry
SC192_16620 CDS
T11468
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aczq Acinetobacter sp. 2019-01-05
Pathway
aczq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aczq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SC192_16620 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aczq03400
]
SC192_16620 (recD)
Enzymes [BR:
aczq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SC192_16620 (recD)
DNA repair and recombination proteins [BR:
aczq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SC192_16620 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
UvrD-helicase
AAA_11
SH3_13
Viral_helicase1
NAT10_TcmA_helicase
SLFN-g3_helicase
ResIII
AAA_22
Herpes_Helicase
PhoH
DEAD
nSTAND3
T2SSE
PIF1
NPHP3_N
AAA
Flavi_DEAD
ABC_tran
AAA_28
Motif
Other DBs
NCBI-ProteinID:
XMB92469
LinkDB
All DBs
Position
complement(3488514..3490265)
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AA seq
583 aa
AA seq
DB search
MDNLNSPEQSDLSWLTTWSTFLNQAPFTAQKQTPEAASFLQQLIEASLQGDSCIEISPEQ
IEALGQLVISAEQAISQVAPCVHDGQGLALYRYWNLEQRLAEQIRRLKQQPIQPISCEGY
LELLTDPHQQAALQMVTQQSLSIITGGPGTGKTYTLARIIAVLSQAIPNIRVAMAAPTGK
AAQRMQEALQNSFNDPKLLESGLVSDELRNQSTQTIHRLLGMGHSQTPRFHQKQPLPYDV
IVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIDALSENRVH
LQTSRRFAEDALIGQVARFIQMQTGQMDHEQVLQQFEVDIVQVSELRSIPLQTDMPDVVQ
LEYLPEDSPIALEPYYQKLMVGFQGYVHSLKNYLQNDRSLEDIEKIVKAFDDYRILTAVR
HGPFGLQQLNQYAERWLQQQLGIVTLGGWYIGRPVMMTYNDYQLGISNGDIGLCFEHRTQ
PEQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQAAKNLLSQELI
YTAITRAKKVVSLLVHQDALLQSFTVRTTRRSGLVEKVNRLVR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctaaacagccctgaacaaagcgatttaagctggttaacgacttggagtacc
tttctaaatcaagctccgtttactgcacagaaacaaacgccagaagcggctagtttttta
cagcagcttattgaagcaagtttgcagggtgacagttgtattgagattagcccagagcaa
atcgaagcacttggtcaactggttatatcggctgaacaagcgatatctcaggttgcacct
tgtgtccacgacgggcaggggttggcattataccgatattggaatctagagcaacgccta
gctgaacaaattcgtcgattaaagcaacaaccaattcagcccatttcttgtgaaggatat
ttggagctactaacagacccgcatcagcaagctgcactacaaatggtgactcagcagagc
ttgagtattattacaggtgggccaggtacggggaaaacctatacgcttgcacgtattatt
gcggtgctgagccaagcaattcctaatattcgtgtggccatggcagctccgacgggtaaa
gctgcacagcgtatgcaagaagccttacaaaactcgtttaatgaccccaaacttcttgag
tcgggattggtgagtgatgaattaagaaaccaaagcacccagactattcatcgattatta
ggaatggggcatagccaaacaccacggtttcatcaaaaacaacctttgccttacgatgtc
attgtggtggatgaagcttctatgctggatttaaatctggcaacgttgttatttgaagca
gttcctgagtcttgccgaattattttattaggtgatgccaaccagcttgcttctgtagat
gtcggagctgtacttgccgatttacagcaaattgatgctttgtctgaaaaccgtgttcac
cttcaaaccagccgccgttttgcagaagatgcattaattggacaagtggcacgatttatt
caaatgcaaactggtcaaatggatcatgagcaagttttgcagcaatttgaagtcgatatt
gttcaggtttcagagctgcgttcaatacctttacaaactgatatgcccgatgtggttcag
cttgagtatttacctgaagattcacctatagcattagagccttactatcaaaaattaatg
gtgggctttcaaggctatgtgcacagcctaaaaaattatttacaaaatgatcgctcactt
gaggacattgaaaagatagtaaaagcatttgatgactatcgtattttgacagctgtacgt
catggaccatttggcttgcagcaacttaatcaatatgcagagcgctggttacaacagcag
ctaggtatcgtgactttaggtggatggtatatcggccgtccagtcatgatgacttataac
gattaccagcttggtatttcaaatggtgacattggtttatgttttgaacacagaacccaa
ccggaacagtttgaagtttattttccaagtttaaataagtgggttgctgcaaatcggttg
cctaaaagtattcaaagtgcatttgctttaaccattcacaaatcgcaaggttctgaattt
acacatactgctgttgtgcttgatcaggcagcaaagaatttgttaagccaagagctgatt
tataccgcgattacacgggcaaaaaaagtagtgagccttttggttcatcaagatgcgtta
ttacaatcttttacagttcggactaccaggagaagtggtttagttgaaaaagttaatcgc
ttagttcgttaa
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