Alistipes dispar: A5CPEGH6_05690
Help
Entry
A5CPEGH6_05690 CDS
T06629
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ada
Alistipes dispar
Pathway
ada03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ada00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5CPEGH6_05690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ada03019
]
A5CPEGH6_05690
03400 DNA repair and recombination proteins [BR:
ada03400
]
A5CPEGH6_05690
Enzymes [BR:
ada01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A5CPEGH6_05690
Messenger RNA biogenesis [BR:
ada03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A5CPEGH6_05690
DNA repair and recombination proteins [BR:
ada03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A5CPEGH6_05690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
BBL05931
UniProt:
A0A4Y1WY79
LinkDB
All DBs
Position
complement(634958..637150)
Genome browser
AA seq
730 aa
AA seq
DB search
MEQYDSASLHGKLKEYFGFSSFKGNQEAVIRNVLEGKDTFVLMPTGGGKSLCYQLPALLM
DGVAIVISPLIALMKNQVDAMRTFSAESGIAHFLNSSLNKTAVTQVRSDVLAGKTKLLYF
APESLTKEDNVAFLRKIRISFYAIDEAHCISEWGHDFRPEYRRIRPIINEIGPAPLIALT
ATATPKVQLDIQKNLGMSDAAVFKSSFNRPNLYYEIRPKHDVDREIIRFIKQNEGKSGII
YCLSRKKVEELTELLVANGIRALAYHAGMDAATRAANQDAFLMERVEVIVATIAFGMGID
KPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGHCLTFYSYKDIQKLEKFMQGKPVAEQE
IGKLLLLETVSYAESSMCRRKTLLHYFGEEYTEENCGNCDNCRHPKPRIDARAALRMALE
ALRDLGDKFKTDYLINVLVGKNTALIKSYGHNKSKWFGAGAEHDARFWGAVLRQALIMGL
VDKNIENYGLISINKRGEDYVAMPYPVTVTLDHDYDEEEKEAEAVAPVGRGGAADEELFS
MLKDLRKKVAKQHGLPPFVIFQDPSLEDMAVQYPVTIEEMQNITGVGVGKARKFGAEFVK
LIKAYVEEKEIIRPQDMVVKSVASKSGNKIFIIQSIDRKMDFEDIARAKDLDFDELLTEI
EGIVNSGTKLDISYYLKDFMDEDKVEDIYLYFKEDAESDSLDAAIGELGSDYTEEEIRLV
RIKFICEQGN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatacgattcggcctccttgcacggcaaactgaaagagtatttcggcttttcg
tcgttcaaggggaatcaggaggcggtcatccgcaatgtactggaggggaaggatacgttc
gtgctcatgcccacgggcgggggcaagtcgttgtgttaccagctccctgcgttgctcatg
gacggggtggccatcgtcatctcgccgctgatcgccctgatgaagaaccaggtggatgcc
atgcgcaccttctcggccgagtcgggcatcgcccatttcctcaattcgtcgctcaacaag
acggccgtcacgcaggtacgctcggacgtgctggcgggcaagaccaagctgctctacttc
gctcccgaatcgctcaccaaggaggacaacgtggcgttcctgcgcaagatacggatttcg
ttctacgccatcgacgaggcgcactgcatctcggagtggggccacgacttccgcccggag
taccgccgtatccggccgatcatcaacgagatcggtccggcgccgctgatcgccctgacg
gccacggccacccccaaggtgcagctcgacatccagaagaacctgggcatgtccgacgcc
gcggttttcaagtcgtcgttcaaccgtccgaacctctactacgagatccggcccaaacac
gacgtggaccgcgagatcatccgcttcatcaagcagaacgagggcaagagcggcatcatc
tactgcctgagccgcaagaaggtcgaggagctcacggaactgctcgtggccaacggcatc
cgcgcgctggcctaccacgccggcatggacgccgcgacgcgcgccgccaaccaggacgcc
ttcctcatggagcgcgtcgaggtgatcgtcgccacgatcgctttcggcatgggcatcgac
aagcccgacgtgcgctacgtcatccactacgacattcccaagtcgctcgagggctactac
caggagacggggcgtgcgggccgcgacggcggcgaaggacactgcctgaccttttacagc
tacaaggacattcagaagctcgagaagttcatgcagggcaagcccgtcgccgagcaggag
atcgggaagctgctgctgctcgagacggtctcctacgccgagagttcgatgtgccgccgc
aagacgctgctgcactatttcggcgaggagtacaccgaggagaactgcggcaactgcgac
aactgccgccatcccaagcccaggatcgacgcccgggctgcgctccgcatggccctcgag
gcgctgcgcgacctcggcgacaagttcaagacggactacctgatcaatgtgctggtgggc
aagaatacggccctcatcaagagctacgggcacaacaagtcgaagtggttcggcgcgggg
gccgagcacgacgcgcggttctggggcgcggtgctgcggcaggcgctcatcatgggactg
gtggacaagaatatcgagaattacggcctgatttcgatcaacaagcggggcgaggactat
gtggccatgccctatccggtcaccgtgaccctcgaccacgactacgacgaggaggagaag
gaggccgaggccgtggctccggtggggcgcggcggcgcggccgacgaggagctcttctcg
atgctcaaggacctgcgcaagaaggtcgccaagcagcacgggctgccgcctttcgtcatt
ttccaggacccgtcgctcgaggatatggccgtgcagtatcccgtgacgatcgaggagatg
cagaacatcacgggcgtcggcgtgggcaaggcccgcaagttcggcgcggagttcgtcaag
ctcatcaaggcctacgtcgaggagaaggagatcatccggccgcaggacatggtcgtcaag
tcggtggccagcaagtcgggcaacaagattttcatcatccagtcgatcgaccgcaagatg
gacttcgaggacatcgcccgggctaaggacctcgatttcgacgagctgctcacggagatc
gaaggcatcgtcaattcgggtacgaaactcgatatttcgtactacctgaaggatttcatg
gacgaggacaaggtggaagacatttacctctacttcaaggaggacgccgagagcgattcg
ctcgacgcggccatcggggagctggggtcggactataccgaggaggagatccgtctggtg
cgaatcaaattcatctgcgagcagggcaactga
DBGET
integrated database retrieval system
