Alistipes dispar: A5CPEGH6_07970
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Entry
A5CPEGH6_07970 CDS
T06629
Symbol
hupB_1
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
ada
Alistipes dispar
Brite
KEGG Orthology (KO) [BR:
ada00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ada03032
]
A5CPEGH6_07970 (hupB_1)
03036 Chromosome and associated proteins [BR:
ada03036
]
A5CPEGH6_07970 (hupB_1)
03400 DNA repair and recombination proteins [BR:
ada03400
]
A5CPEGH6_07970 (hupB_1)
DNA replication proteins [BR:
ada03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A5CPEGH6_07970 (hupB_1)
Chromosome and associated proteins [BR:
ada03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A5CPEGH6_07970 (hupB_1)
DNA repair and recombination proteins [BR:
ada03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A5CPEGH6_07970 (hupB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
BBL06159
UniProt:
A0A4Y1X0Z0
LinkDB
All DBs
Position
909341..909601
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AA seq
86 aa
AA seq
DB search
MNKTQLVEAIALDANISKIEARKAVDALIRVTVQALREEERITLTGLGTFSVQHKAARTG
RNPRTGATVKIPPRKSVKFRLSAEIE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacgcagcttgtcgaggcgatagccctcgacgccaatatctcgaaaatcgaa
gcccgcaaggccgtggacgctctgatccgcgtcacggtacaggccctgcgcgaagaggaa
cgaatcaccctgaccggtctgggaaccttcagcgtgcagcacaaggccgcccgcacggga
cgcaatccccgtacgggcgcaacggtcaagattccgccgcgcaagagcgtcaaattccgc
ctctcggccgagatcgaatga
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