Alistipes dispar: A5CPEGH6_14120
Help
Entry
A5CPEGH6_14120 CDS
T06629
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ada
Alistipes dispar
Brite
KEGG Orthology (KO) [BR:
ada00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ada03032
]
A5CPEGH6_14120 (topA)
03400 DNA repair and recombination proteins [BR:
ada03400
]
A5CPEGH6_14120 (topA)
Enzymes [BR:
ada01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A5CPEGH6_14120 (topA)
DNA replication proteins [BR:
ada03032
]
Prokaryotic type
DNA Topoisomerases
A5CPEGH6_14120 (topA)
DNA repair and recombination proteins [BR:
ada03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A5CPEGH6_14120 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BBL06774
UniProt:
A0A4Y1X232
LinkDB
All DBs
Position
complement(1733663..1735960)
Genome browser
AA seq
765 aa
AA seq
DB search
MQDNLVIVESPAKAKTIEKFLGKDYIVKSSFGHIRDLSKKDLGINIDDGFKPVYEIPGDK
KKVVDELAKLAKTKTVWLASDEDREGEAIAWHLTEVLGLPVDRTKRIVFHEITKRAILEA
IEKPRTVNMDLVNAQQARRILDRLVGFELSPVLWKKVRPALSAGRVQSVAVRLIVERERE
IIAFRSTPYFRVVAQFYPAGDADRTLFKAELSSRFETAAEAEAFLRSSAGAEFTVSKAEE
KPAQRYPAPPFTTSTLQQEAGRKLGMSVSQTMSVAQHLYEQGLITYMRTDSVNLSQQALA
QCKEEITKLYGEKYSSWHNYKTKTKGAQEAHEAIRPSYIDRQTIEGTPAEKKLYDLIWKR
TVASQMVCAELDRTTITIDISGSEHQFVAQGEVIRFDGFLRLYSESTDDDQAAESGEGLL
PKLTAGDRVTPAQITATERFTQAPPRYSEASLVKQMEALGIGRPSTYAPTITTIINRGYV
VRQSKEGSKRSYTQMTLTGDKLTTKTLTESFGKEKNRLSPTDIGMVVNDYLEAQFGPIID
YNFTANVEKEFDRIAEGDITWEKMIGNFYGPFHKMVDSAIAMQPARTREVRILGNDPATG
HVVKARIGRYGPMVEIEGAEGEKGRFASLRKGQLIESITLDEALELFALPRDLGLLDGEK
LIVGLGKYGPYVRYGKSFASLARTDDPYTITYERAVELVREHKAAAAAAHTPLRTFPEDP
DMLVKNGRYGAYIAYKGKNYRLPRGTKPETLTLDDCLKIVSESKK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaatttagtcatcgtagagtcccctgccaaggccaagaccatcgagaagttc
ctcggcaaggactatatcgtaaaatcgagcttcggacacatccgcgacctctcgaagaag
gacctcggaatcaatatcgacgacggcttcaagcccgtctatgagattccgggcgacaag
aagaaggtcgtggacgagcttgcgaaactcgcgaagacgaagaccgtgtggctcgcttcc
gatgaagaccgcgaaggagaggccatcgcatggcacctgaccgaagtgttggggctcccg
gtcgatcggacgaagcgcatcgtcttccacgaaatcaccaagcgggcgatcctcgaagcc
atcgagaaaccccgcacggtcaatatggacctggtgaacgcccagcaggcgcgccgcatc
ctcgaccggctggtgggcttcgagctctcgcccgtgctgtggaaaaaggtgcgcccggcg
ctgtcggcgggccgcgtgcagtcggtcgccgtgcggctgatcgtcgaacgcgagcgcgag
atcatcgctttccgttcgactccctatttccgcgtcgtggcgcagttctaccccgccgga
gatgcggacaggacactcttcaaggccgagctgtcctcgcgcttcgagacggccgccgag
gccgaagcgttcctccgcagctcggccggcgccgagttcacggtgtcgaaagccgaggag
aagcccgcacagcgttatcccgcgccgcccttcacgacctcgacgctccagcaggaggcg
ggccgcaagctgggcatgtcggtctcgcaaaccatgtccgtggcgcagcacctctacgag
cagggtctgatcacctacatgcgtaccgactcggtgaacctctcgcagcaggcgctcgcg
cagtgcaaggaggagatcacgaaactctacggcgagaaatactcgtcgtggcacaactac
aagaccaagaccaagggcgcgcaggaggcccacgaggccatccgcccgtcgtacatcgac
cgccagacgatcgaaggcacgccggccgagaaaaaactctacgacctgatctggaaacgc
acggtcgcctcgcagatggtctgcgccgagctcgaccgcacgaccatcaccatcgacatc
agcggttcggagcaccagttcgtcgcccagggcgaggtcatccgcttcgacggattcctg
cgcctctattccgaatccacggacgacgaccaggccgccgagagcggcgaggggctgctc
ccgaaactcacggccggcgaccgcgtgacgccggcgcagatcaccgcgacggagcgcttc
acgcaggctccgccccgatacagcgaagcgtcgctggtcaagcagatggaggcgctcggc
atcggccgcccctcgacctacgccccgacgatcacgacgatcatcaaccgcggctatgtc
gtccgccagagcaaggagggttcgaaacgcagctatacgcagatgacgctcacgggagac
aaactcacgacgaagaccctcacggagagcttcggcaaggagaagaaccgcctctcgccg
accgacatcggcatggtggtgaacgactacctcgaggcgcagttcggcccgatcatcgac
tacaacttcacggcaaacgtcgagaaggagttcgaccgcatcgccgaaggcgacatcacg
tgggagaagatgatcggcaacttctacggaccgtttcacaaaatggtggactcggcgatc
gccatgcagcccgcccggacgcgcgaagtgcgcatcctgggcaacgaccccgcgacggga
catgtcgtgaaggcccgcatcggacgctacggcccgatggtcgagatcgagggcgccgaa
ggcgagaagggccgcttcgcctcgctcaggaaggggcagctcatcgagtcgatcaccctg
gacgaggcgctcgaactcttcgccctgccgcgcgacctgggactgctcgacggcgagaag
ctcatcgtgggactgggcaagtacggaccctacgtccgctacggaaagtcgttcgcctcg
ctggcgcggaccgacgacccctacacgatcacctacgagcgggccgtggagctcgtccgg
gagcacaaggcggccgccgctgcggcccatacgccgctccggaccttccccgaagacccc
gacatgctcgtcaagaacggccgctacggcgcctatatcgcctacaagggcaagaactac
cgcctgccgcggggaaccaagcccgaaaccctgacgctggacgactgtctgaagatcgtt
tcggagtcgaagaaatga
DBGET
integrated database retrieval system
