Alistipes dispar: A5CPEGH6_19420
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Entry
A5CPEGH6_19420 CDS
T06629
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ada
Alistipes dispar
Pathway
ada03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ada00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5CPEGH6_19420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ada03019
]
A5CPEGH6_19420
Enzymes [BR:
ada01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A5CPEGH6_19420
Messenger RNA biogenesis [BR:
ada03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A5CPEGH6_19420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
BBL07304
UniProt:
A0A4Y1X3G3
LinkDB
All DBs
Position
2365256..2366746
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AA seq
496 aa
AA seq
DB search
MRFDELDLEDEILDGLEDMNFHEMTPVQEHTIPVILEGRDIIGCAQTGTGKTAAYTLPLL
NKLLVGGNPDNVVKSVIIVPTRELAQQIDQQFQGFSYYLPVSTTVVYGGGDGKGWDAQKR
GMLMGSDVVIATPGRMIAHLQNSGVDLSHVEYLILDEADRMLDMGFSDDIMKIVSYMPKE
RQTIMFSATLPPKIRELAKTILRNPAEVNIAISKPNEAIDQSAYICYESQKLGIIREMFA
EPTESKTIIFSSSKLKVKELAHTLKRMKLNVAAMHSDLEQAQREEVMLNFKNNKVNILVA
TDIVARGIDIEDIGLVINYDVPHDPEDYIHRIGRTARAAATGSAVTFVCEEEQGKFRAIE
KFIEKDIRKAELPAVVGEGPAYNPEAFSGRGRGRGGRSKGGDGRGHGRGRRDRLRDNKGR
GGSSSARDAQPAASAAAAVSGAAPQPGASDGAGQQAAGQDGAKRRRRHRGGRNRRRGGNG
RGGDASAVSAPTQSAE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgacgaactcgacctggaggatgagatcctcgacggtctcgaggatatgaat
ttccatgaaatgactcccgtgcaggagcacacgattcccgtgattctggagggccgcgac
atcatcggctgcgcccagaccggaacgggcaagacggcagcctatacgctgccgctgctg
aacaagctgctcgtcgggggcaatcccgacaatgtggtgaaatcggtcatcatcgtgccc
acgcgcgagctggcgcagcagatcgaccagcagttccagggtttctcgtattatctgccc
gtctcgacgacggtggtctatggcggcggcgacggcaagggctgggacgcccagaaacgc
gggatgctgatgggttcggacgtcgtgatcgccacgccgggccgcatgatcgcccacctg
cagaacagcggcgtggacctttcgcacgtggagtacctgattctcgacgaggcggaccgg
atgctcgacatgggtttcagcgacgacatcatgaaaatcgtctcctacatgcccaaggag
cggcagacgatcatgttctcggcgacgctgcctccgaagatccgcgagctggccaagacc
atcctgcgcaaccccgcggaggtgaacatcgccatttcgaaacccaacgaggccatcgac
cagtcggcctatatctgctacgaaagtcagaaactgggcatcatccgcgaaatgttcgcc
gagcccaccgagtcgaagacgatcatcttctcctcgtcgaaactcaaggtcaaggagctg
gcccatacgctcaagcgcatgaagctcaacgtcgcggccatgcactccgacctggagcag
gcgcagcgcgaggaggtgatgctcaatttcaagaacaacaaggtgaatatcctggtggcc
accgacatcgtggcgcgcggcatcgacatcgaggacatcggactggtgatcaactacgac
gtgccgcacgacccggaggattacatccaccgcatcggccgtacggcgcgcgccgcggcg
acgggcagcgccgtgacgttcgtctgcgaggaggagcaggggaagttccgtgcgatcgag
aagttcatcgagaaggacatccgcaaggccgaactgcccgccgtcgtgggcgaaggcccc
gcctacaatcccgaggccttttcgggccggggacgcggccggggcgggcgcagcaagggc
ggcgacggacgcgggcacggccggggacgccgggaccggctgcgcgacaacaaggggcgc
ggcggctcgtcctctgcgcgggatgcgcagcccgccgcatctgcggcggcggccgtatcg
ggagcggctccgcagcccggggcatcggacggcgccggacagcaggccgccgggcaggac
ggagcgaagaggcgccggcgccaccgcggcggccgcaaccgtcggcgcggcggcaacgga
cggggaggcgacgcctctgcggtttcggccccgacgcaatcggcggaatag
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