Alistipes dispar: A5CPEGH6_22670
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Entry
A5CPEGH6_22670 CDS
T06629
Name
(GenBank) MBL fold hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ada
Alistipes dispar
Pathway
ada03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ada00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5CPEGH6_22670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ada03019
]
A5CPEGH6_22670
Messenger RNA biogenesis [BR:
ada03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A5CPEGH6_22670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
ERCC4
Motif
Other DBs
NCBI-ProteinID:
BBL07629
UniProt:
A0A4Y1X566
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Position
complement(2793149..2794432)
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AA seq
427 aa
AA seq
DB search
MTITIHRGIDQIGGCITEIRTARSKILIDLGHNLPKGNGPSEDRFDNAGAIAQLCEGCDA
VFYTHYHGDHVDLFRHVPERVDQYIGPLAKAVMRIRLEHLTHVPGEKERREADLTAVERF
KTYEPARCIRVGKDIRITPYFVSHSAADAYMFLVEADGKRILHTGDFRQHGYLGKGLLPT
LEKYIAPQGIDVLITEGTMLDRNEKKIVHENDLKRQAIELMKRYKNVFVLCSSTDMDRLA
TFHRANREMRNRPFVCDGYQQRILESFAGHAGVKSPLFKFDHKVYGSDERNEKLRKWMLD
TGFTMLLRTGPKYRRWVDTLLPELNPDETLLIYSMFRGYILPTHEAYNPDLKAFVARFPH
SEYVHTSGHATTDTLAAVCRTVPPHTAIIPIHRDKGSDFASLDIGDELRSKIVTASQTID
GIDFLVK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaccatccaccgcggcatcgaccagatcggcgggtgcatcaccgaaatccgg
accgcccggtcgaaaattctgatcgatcttggacataaccttcccaaaggcaacggcccg
tcggaagaccggttcgacaatgccggggccattgcacaactgtgcgagggatgcgatgcg
gtattctacacgcactatcacggcgatcacgtggatttattccggcatgtgccggagcgg
gtcgatcaatatatcgggccgttagccaaagccgtaatgcgcatccggctggaacacctg
acgcatgttccgggcgagaaagagcgacgggaagccgatttgacggccgtcgagcgattc
aagacctacgaacccgcccgttgtatacgggtcggaaaagatattcggattacgccctat
ttcgtcagtcactcggcagccgacgcctatatgtttctcgtcgaggccgacggcaaacgg
attctgcatacgggcgatttccggcagcacggctatttggggaaaggactgctgccgacg
ctcgaaaaatacatcgcaccgcaaggtatcgacgtattgattaccgagggaacgatgctc
gaccgcaacgagaagaaaatcgtccacgagaacgacctgaaacgacaggctattgagttg
atgaaacgctacaaaaacgtcttcgtactctgctcctcgacggatatggaccggttggcg
acttttcaccgggcaaatcgggaaatgcgtaaccgtccgttcgtatgcgacggctatcaa
cagcggattctggaatcgttcgccggtcatgccggggtgaaaagcccgcttttcaaattc
gatcacaaggtttacggttccgacgaacggaatgaaaaactgcggaaatggatgttggat
acgggattcacgatgttgctgcgcaccggccccaagtatcggcggtgggtcgacacgttg
ctaccggaactgaatccggatgaaaccctattgatttactcgatgttccgcggctatatt
cttccgacgcacgaagcctataatccggatctgaaggcattcgtcgcccggtttccgcac
tctgaatacgtgcatacatcgggacatgcgacaaccgatacgctggccgccgtttgccgc
acggtccctccgcatacagcaatcattccgatccatcgggataaaggctccgatttcgcc
tcgctcgacatcggagacgaactgcggtcgaaaatcgttacggcttcacaaacgatcgac
gggatagatttcctcgtaaaatag
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