Alternaria dauci: 96080543
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Entry
96080543 CDS
T10615
Symbol
ACET3X_000221
Name
(RefSeq) hypothetical protein
KO
K12842
U2-associated protein SR140
Organism
adac Alternaria dauci
Pathway
adac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
96080543 (ACET3X_000221)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adac03041
]
96080543 (ACET3X_000221)
Spliceosome [BR:
adac03041
]
Complex A
U2 snRNP components
U2 related factors
96080543 (ACET3X_000221)
Complex B
96080543 (ACET3X_000221)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Surp
NCKAP5
RRM_1
Motif
Other DBs
NCBI-GeneID:
96080543
NCBI-ProteinID:
XP_069310463
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Position
1:710847..712961
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AA seq
704 aa
AA seq
DB search
MAFKFSLGTAKATKAQLNAKAKEEEEAKQREEKNALDKVMADFEAEHGAEKSILGEPEKQ
VEEDVFVPTGSKRHFTGRQRTMKSGPGTLETEPLDDYSRSGVAPGRLAPQMQPRFGGNAP
SGPTSLEGPKQPENVYTTVVAKASNLPPSIDTRRVEELFADFPSLKIARVEKIPPQGPSP
KGRPSATMKVIFDRDANARDLDDAMNKLNDKKYLGKGYYLHLDRYLGGRSVDTAQRTEAF
GARWQAPELPKGFAPPPDLGGGGGGGRDRPREDTEQLIVTANQPPDAATLRLVHQTIEGV
ILGGVEFEAALMNDPQVQDEERFAWLYDQKHPVNRYYRWRLHQIVCDSPNPEIFERHGDW
RGPQDPLPHEFADHLGAFESDDESLDSDDEEEKEKPQYKPLPVGDNYPGRVDNGHGIMDP
RSRAMLLWMLTTVPPGSIVADDIAAISNFAVEHAGQGMDEVTSILVSNIIQPFQLTDANP
RNRASDAEGKDDLRRPDLRQVTLNALRIVSDVLFVTAKESGVSYKYRLAIGTELVDRKVF
EHLEQIPARLEMGRMTERSFREEVNTILKVWEEEHLFDDATLKHLDEAFNARERQKQEDE
EARRLAERRKRKSNVVRKIPTSEATEGGEQAMDVDEAAEEATVEPQETSATATPEVSVAE
AVAPLEPPKAADPKEVEIPGETAVARARRLRPKAEDMFALDEED
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaagttctctctaggcaccgcgaaagccaccaaggcgcagttgaatgcgaaa
gccaaggaggaagaggaagcgaagcagcgcgaggagaagaatgcgctcgacaaggtcatg
gctgattttgaggcggagcatggcgcagagaagagcatactcggcgagcctgagaagcag
gtcgaggaagatgtctttgtgccaacagggagtaagagacattttacaggcagacagcga
acgatgaagagcggccccggcactctcgaaaccgaacctctcgatgactattcacgatcc
ggcgtagcgccaggccgtcttgcacctcagatgcagccacgatttggggggaatgcaccc
tcaggtcccacgtcgctcgagggccccaagcagccagaaaacgtctataccaccgtcgta
gcgaaagcctcaaacctcccgccctcgatagatacgcgtcgggtagaagagctcttcgcc
gacttcccgtcgctcaaaattgcccgcgtcgagaagataccaccgcaaggcccatcgcca
aagggcagaccgtcggcgacgatgaaggtcattttcgacagagatgccaacgcgcgggac
ctcgacgatgcgatgaacaagctcaacgacaagaagtacttgggaaaaggctattatctg
catttggacaggtaccttggtggtcgctcagtggacacagcgcagcggacggaggcattt
ggtgcacggtggcaggctcctgaactgcccaagggctttgcgcctccaccagatcttggc
gggggaggtggaggtggcagagatcggccgcgcgaagatactgagcagctcattgtcact
gcaaaccagcccccggatgctgccacactcagactggtgcatcagaccatagaaggggtc
atacttggaggcgtagagttcgaagctgccttgatgaacgatccacaagtccaagacgag
gaacgattcgcttggctgtacgaccagaagcaccccgtcaaccggtattaccgttggcgc
ttacatcagatcgtttgcgatagccccaatcccgagatcttcgagaggcatggcgattgg
cggggcccgcaggatccacttccccacgagttcgccgaccatctgggagcgtttgagtct
gacgacgagagcttggacagtgacgacgaggaagagaaggagaagccgcagtacaagccc
ctgccagttggcgacaactaccctggacgagtcgacaatggtcacggcattatggacccc
agatcacgagccatgcttctgtggatgcttactaccgttcccccaggtagcatcgttgct
gatgacatcgccgccatatcgaactttgctgttgaacacgccgggcagggcatggatgaa
gtcactagcatcctggtgtccaacattatacagcccttccagctcaccgatgccaatccg
cgaaaccgtgcaagcgatgcggaaggcaaagacgatcttcgacgtcctgatcttcgacag
gtaacgctaaacgccttgcgcatcgtctctgatgtgctctttgtcacggctaaagagtct
ggtgtctcctacaagtatcgtctagctataggtacggagcttgtggatcgcaaggtcttc
gaacatctcgaacagatccccgcgaggctcgagatgggtcgcatgacggagaggagcttc
agagaagaagtcaacactatactcaaagtctgggaggaggagcatttgtttgacgacgca
acactgaaacacctcgacgaggcgttcaatgcgcgggagagacaaaagcaggaagacgag
gaggcgagacggttggcagagaggaggaaacgcaagagcaacgtggtccgcaaaataccg
acttccgaagcgaccgaggggggtgagcaggcgatggacgttgacgaggccgcggaggaa
gcgacggttgagccccaagagacttctgcgacagcgactccagaggtatctgtagctgaa
gctgtcgcgcccttagaaccacccaaagcagccgacccaaaagaagttgagatacctgga
gagacggctgtcgccagagctcgccggctgaggcccaaggctgaagacatgtttgcgctg
gacgaggaggactaa
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