Alternaria dauci: 96080796
Help
Entry
96080796 CDS
T10615
Symbol
ACET3X_000474
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
adac Alternaria dauci
Pathway
adac03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
96080796 (ACET3X_000474)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
96080796
NCBI-ProteinID:
XP_069310716
LinkDB
All DBs
Position
1:complement(join(1488773..1490588,1490635..1490822,1490874..1491224))
Genome browser
AA seq
784 aa
AA seq
DB search
MDSFKTLQTEISAALKSTTKSASLIGAADIPFQRSLNPDAGTQLDAQNARLLHLAQRLLE
NAAASSDAVGPKLPDVEAIDANWRGVVDVIDSLLEKADTSLDEYTGVVKRLSPATEQTTA
KPRPNIADRKTIAKPQLQFEHLPTNYETGGFRPLVTAKPHAKVPLDECLQTFKDKRGREQ
YPHPYQTEIETYEYPPTVYEYHEPQQYPPFESTTATFVDTPEALAAMLRELKTAKEIAID
LEHHDTRSYIGMVSLMQISTRDKDWIVDTLKPWRRKLECLNEVFADPSILKVLHGAYMDI
IWLQRDLGLYIVGLFDTYHAARALGYPGASLAYLLERHVQFTAQKQYQLADWRTRPLSKE
LFEYARADTHFLLYVYDNMRNELVEKSDFSNPEKNKIQDVLQKSKETALQRYEHPVYDME
MGLGTAGWYKLISRTPVQFTPQQFAVFRAVHRWRDELSRKEDESPLFIMPNHAVFSVART
IPANKAALFNAIQQVTHIIRAHADELVAVIAKAKEEGVGGPELHNMLQTIADMQRAERAE
SYAAVKAAEATAVPAVESAAFESTVAVPATRAASSEFWGRLWKANEASQRREIHTLDVDL
ALPLPPLTAQIFADANGVTQTTPKAEKPQHTFVPKEQRPAEDHRTDTFVVKHLGGRKRKR
GDAVENEPSTTTPALDPMTNDEIMLDASEEASDADRARAKAAKKAARKQKKKEAAGLNYG
DEPAFDYANAKSVLHAEDGDGKKKKKDKKKKSAAFAPFSGMSDAPKGLPRAQKEVPGRSK
TFTK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggattccttcaagacgctccagacagagatctcggccgccctcaagtcgactaccaag
tctgcctccctgataggcgcagcggacattccctttcaacggtcactcaaccccgatgct
ggcacacagctggacgcccagaatgcgcgccttcttcacctcgcgcagcgcctgctcgag
aatgctgctgcgagctcggacgctgtaggtcccaagctgcccgacgtcgaagccatagac
gccaattggaggggggttgttgatgtcatcgacagcttgcttgagaaggccgacaccagt
ctcgacgagtacacgggtgttgttaagcgactgagtcccgcgaccgagcagacaaccgcg
aagccgcgcccaaatatcgcagacagaaaaaccatcgcgaagccacaactccagtttgag
cacttgcccaccaactacgagactggcggcttccgccctttggtcacagccaagccgcat
gccaaagttccgctcgatgaatgtttgcagactttcaaagacaagcgcggacgggaacaa
tacccccacccataccagaccgagatcgaaacctacgaatatcctccgaccgtatacgag
taccacgagccgcagcaatacccccccttcgagtctaccaccgcaacctttgttgatacc
cctgaagcgctagctgccatgctccgagagctgaaaacggcaaaggaaattgctattgac
ctggaacaccacgacacccgctcatacatcggcatggtttcgctgatgcaaataagcacg
cgcgacaaggattggatagtcgacacactgaagccctggcggcggaagctcgagtgtctg
aacgaggtgttcgctgatcccagcatcttgaaggttctacacggtgcatacatggacatc
atctggcttcaacgtgaccttggactgtatatcgtcggcctctttgacacgtaccatgct
gctcgagctcttggctatcctggtgccagtctggcttacctgcttgagaggcatgttcaa
ttcacagcccagaaacagtaccaactggcagattggcgcaccaggccgctcagcaaggaa
ctgttcgaatacgcacgcgccgacacccacttcctcctatacgtatacgacaatatgcgg
aacgaactagtcgagaagtccgacttctctaatcccgagaaaaacaagattcaggacgta
ctgcaaaaatccaaagagacagcgctacaacgatacgagcaccctgtttacgatatggag
atgggtcttggaacagctggctggtacaagctcatctcacggacacctgtgcagtttacc
ccacagcagtttgcggtcttccgagctgtgcacaggtggagagacgaactcagccggaaa
gaagacgaaagcccgcttttcatcatgcccaaccacgccgtgttttccgtagctcgtacg
atccctgcgaacaaggctgctctctttaacgctatccaacaggtaacgcacatcatccga
gcccatgcggacgagctcgtagctgtgatcgcaaaggctaaagaagagggcgtcggggga
ccagagttgcataacatgcttcagacaatcgccgacatgcaaagagcggaaagggctgag
tcgtatgcggctgtaaaggcagcagaggcgactgcagtcccagctgttgaaagtgcagca
tttgagagtaccgtggccgtccccgctacccgcgctgcatcttctgagttctggggacga
ttgtggaaagccaacgaggcgtcgcagcggcgggagattcacactctggatgtcgatctc
gctctgccgttaccgcctctgactgcgcaaatatttgctgatgcaaatggagtgacacaa
actacaccaaaagcagagaaaccgcagcacacttttgtaccaaaagagcagagacccgcc
gaagaccatcgaaccgacacgttcgtcgtcaagcatctcggtggtcgcaagcgaaagcga
ggagacgccgtagaaaacgagccctccaccacaacaccggccctcgatcctatgacgaac
gacgaaatcatgctagacgcatccgaggaggcatcggatgcagatcgcgcccgtgcaaag
gccgctaagaaggccgcacggaagcaaaagaagaaggaggccgcgggtctcaactacggt
gacgagcctgcctttgactacgcgaacgcaaagtcggtactgcatgcagaagatggcgat
ggcaagaaaaagaagaaggacaagaagaagaagagcgcagcttttgcacccttctccggt
atgtctgatgcaccaaagggactaccgagggcgcaaaaggaagttccaggacgaagcaag
acgtttacgaaatag
DBGET
integrated database retrieval system
