Alternaria dauci: 96080816
Help
Entry
96080816 CDS
T10615
Symbol
ACET3X_000494
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
adac Alternaria dauci
Brite
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
96080816 (ACET3X_000494)
Chromosome and associated proteins [BR:
adac03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
96080816 (ACET3X_000494)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
96080816 (ACET3X_000494)
microRNA pathway
RISC loading complex
96080816 (ACET3X_000494)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
96080816
NCBI-ProteinID:
XP_069310736
LinkDB
All DBs
Position
1:join(1564391..1564624,1565014..1565139,1565188..1565906,1565961..1566096,1566150..1566503,1566560..1567070,1567132..1567391,1567442..1568008)
Genome browser
AA seq
968 aa
AA seq
DB search
MAGPAKKRAQAEKQSNGSSNGSSSQSRDPTQRSAPKSIPRLDGNRDPNVRVPVDYSDPRD
LKNISDFLGMAGWYQARGITIPGSLPQRPKNFNQFGKAANVMLNTFNVMKAPNTVVHQYD
LNYSGDALDYTKRVLLKKIWNSRGVKSELGEPNNLWVWDTNKLAWSGKRLPRDDTRITVD
LDEEEGRPTKPGARGNKHTIHVRWTRQVDFIGLNAFLSGQASWSSECIDTINFLDHVMRE
WPSQQYTQIKKSFFQRGEVRFDLGGGVEAFKGVFASLRPVLDDKFNKSLSVNVDVANGTF
WRAQELTRAIGQVFNCTPPQFAAMYKTALRDWKGSMLKKDLRKFKKVGVSTTHTKEPTQW
TIDEFVNLDASTATFPDPDDRSKKISVAQYFKKKYNVTCMAGVPVVKMTKKIRKEPVYMP
IDVLKIDGNQRYTTKLSDTQTSQMIRFAVTLPKERWAAVQHGVRLLNWGTDPYLRHYGLK
VNPDAAKVRARILPSPNVHFAPGSKEATIKPADMIAGRWRLDGRKFIMNNKERPIKAWGV
CCVQGRGSPPPPAIEAFVQKFVQIYEAHGGLVASHPQHGKKPWMGPGNLADGGEMIQKVW
IQTGNKYAMPPNLLLFVVNDRNVDVYRRIKKSCDIRFGVASQVLQAKHVMSASPQYISNV
CMKVNAKLGGATSVAKSQLIPKIAPKSASIPTMVVGADVSHPAPGAGSGEAASFAAITVS
ADVHFARYWAEVQTNGNRVEMVTTSNIEQHFGFMAKNWMQKIGQGKAPQRVLYIRDGVSE
GQYAAVLEEEVHDMKECFKKLGCKEIPKFTVVIAGKRHHIRFFPEKGDRNGNPLPGTLVE
SGCTHPFEFDFYLCSHVAIKGTARPIHYQCILNEGEWLSAELQQFIFEHSYQYVRSTTPV
SLHPAIYYAHLAADRSRAHLNDNPVSSGKKESKVDQQSSTGSSKQNFEIAPLMEMQNARG
LKDVMWYI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtccagcgaagaagcgcgcgcaggcggagaagcagtccaacggctcgtccaat
ggctcgtcctctcagtctcgcgaccctactcagcgttccgccccaaagtccattcctcgt
cttgacggtaaccgcgatcccaatgttcgcgttcccgttgattactccgatcctcgagac
ctcaagaacatctccgatttccttggtatggccggttggtaccaggctcgcggcatcacc
attccaggttcccttcctcagcgccccaagaacttcaaccagttcggtaaggctgccaat
gtcatgctcaacaccttcaacgtcatgaaggctcccaatacagtggtccaccagtacgat
ctcaactacagcggagacgctctcgactacacaaagcgcgtcctgctgaagaagatctgg
aactcccgtggtgtcaagtccgagcttggtgagcccaacaacctgtgggtctgggacacg
aacaagctggcatggtccggcaagcgtctgcctcgtgatgacacccgcatcactgtcgat
ctcgacgaagaggaaggtcgtcccaccaagccaggtgcgcgtggcaacaagcataccatc
cacgtccgctggacacgccaagttgacttcattggtctgaacgcgttcctcagcggtcaa
gcttcttggtcctccgaatgcatcgacaccatcaacttcctcgatcacgtcatgcgcgag
tggccttcccaacaatacacccagatcaagaagtccttcttccagcgcggagaggttcgc
ttcgaccttggcggcggtgttgaggctttcaagggtgtattcgcctctctccgtcccgtc
ttggatgacaagttcaacaagtctttgtctgtcaacgtcgacgtcgccaatggtaccttc
tggcgtgctcaagagctcactcgcgccatcggacaggtcttcaactgtaccccacctcag
tttgcagccatgtacaagaccgccctgcgcgactggaaaggttcgatgctcaagaaggac
ctccgcaagttcaagaaagttggagtttccactacacacacaaaggaacctacacaatgg
accatcgatgagttcgtcaatttggatgcttctaccgccaccttccccgatccagatgat
cgctctaagaagatttccgtggctcagtacttcaagaagaagtacaatgtcacttgtatg
gctggagttcctgtggtcaagatgacgaagaagatccgcaaggagcctgtctacatgcct
atcgatgtcttgaagatcgacggaaaccagcgatacaccaccaaattgagcgacacccag
acgtcccaaatgattaggttcgccgtcacccttcccaaggagcgctgggctgctgttcag
catggtgttcgacttctcaattggggaactgatccctatctccgccattatggtttgaag
gttaacccagatgccgccaaggtgcgggctcgtattcttccttcacccaacgtccacttc
gcacccggatccaaggaggctaccatcaagcctgcagacatgatcgcaggtcgatggagg
ctcgatggacgcaagttcatcatgaacaacaaagagcgcccaatcaaggcatggggtgtg
tgctgcgtccaaggacgtggcagccctcctcctccagctatcgaggccttcgtccagaag
tttgtacagatctacgaagcccacggcggtctcgttgcctctcatcctcaacatggcaag
aagccgtggatgggtcctggcaaccttgctgacggcggtgagatgattcagaaggtttgg
atccagacaggtaacaagtacgcgatgccgcccaacctgctcctattcgtcgtcaacgac
cgcaacgtcgatgtataccgccgtatcaagaagtcttgcgacatccgctttggtgtggct
tcgcaggtcctccaggcgaagcacgtcatgtcagcttcaccgcagtacatctccaatgtc
tgcatgaaagtcaacgccaaactgggaggtgcaacgagcgttgcgaaatctcagctcatc
cccaagatcgccccgaagtccgcatcgattccgacaatggtcgttggcgctgacgtctct
catcctgctcctggagccggttcgggtgaggctgcatcgtttgccgccatcacggtctcc
gccgacgtccactttgctcgatactgggctgaggtccagaccaacggaaaccgtgttgag
atggtgaccacatccaacatcgagcagcacttcggtttcatggccaagaactggatgcag
aagatcggtcagggcaaagctcctcaacgtgtgctttacatccgcgatggtgtgtccgag
ggacaatacgcagccgttctcgaggaggaagtccatgacatgaaggaatgcttcaagaag
ctgggctgcaaggagatcccaaagttcactgttgttatcgccggcaagcgccaccacatc
cgcttcttccctgagaagggcgataggaacggcaacccacttcctggtactttggtagag
tctggctgcactcatcccttcgagttcgacttctacctttgctcacacgtcgccatcaaa
ggtacagctcgccccatccactaccagtgcatcctcaacgagggtgagtggctgtctgcc
gagctccagcagttcatcttcgagcactcgtaccaatacgttcgctccactactccggtt
tctcttcatcctgctatctactatgcccacctggccgccgatcgctcccgcgcgcatctc
aacgacaacccggtctcctccggcaagaaggagtctaaggtcgaccagcagtcctcaaca
ggctcgtccaagcagaactttgagatcgctcctctgatggagatgcagaacgctcgtgga
ctcaaggatgtcatgtggtacatctag
DBGET
integrated database retrieval system