Alternaria dauci: 96081144
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Entry
96081144 CDS
T10615
Symbol
ACET3X_000822
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
adac Alternaria dauci
Pathway
adac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
96081144 (ACET3X_000822)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adac03041
]
96081144 (ACET3X_000822)
03009 Ribosome biogenesis [BR:
adac03009
]
96081144 (ACET3X_000822)
Enzymes [BR:
adac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
96081144 (ACET3X_000822)
Spliceosome [BR:
adac03041
]
Complex A
U1 snRNP components
U1 related factors
96081144 (ACET3X_000822)
Complex B
96081144 (ACET3X_000822)
Ribosome biogenesis [BR:
adac03009
]
Eukaryotic type
Pre-60S particles
Helicases
96081144 (ACET3X_000822)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF4136
Motif
Other DBs
NCBI-GeneID:
96081144
NCBI-ProteinID:
XP_069311064
UniProt:
A0ABR3UWK3
LinkDB
All DBs
Position
1:join(2669355..2669437,2669738..2669892,2669946..2670914,2670964..2671071,2671523..2671651,2671705..2671863,2671916..2671962)
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AA seq
549 aa
AA seq
DB search
MSYSGGYGGGGGGYGGGGRGGDRGYSNGGGYGGGSNGYSGGGGGYGGGGGGYGGGGFGGG
RDGGDRMSQLGQGLKQQTWDLDSLPKFEKSFYKEDPAVTARSAAEVAEYRKEHQMTVKGE
NIPKPVTTFDEAGFPSYVMNEVKAQGFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLT
YCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPK
GPQIRDLARGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG
QIRPDRQTCMWSATWPKEVRQLAADYQKDWIQVNIGSMDLSANHRIQQIVEVCTEFEKRD
RMAKHLETIMSDKDNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLNEF
KTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTT
ENSKQARDLVQILTESKQQIDPRLHEMARYGGGGGGGGRWGGGRGRGGGRGGRGGWTGGN
SDPVRNSRW
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcggcggctacggcggtggtggaggaggatacggcggcggcggtcgcggc
ggtgaccgcggctactcgaacggtggcggttacggcggtggttcaaacggctactccggt
ggcggaggcggctatggcggaggaggtggtggttatggcggcggcggctttggcggtggt
cgtgacggcggtgatcgcatgtcgcaactaggccagggcctgaagcagcaaacatgggac
ctcgacagcctgcccaaattcgaaaagtctttctacaaggaggaccccgctgttactgcc
cgttcagccgctgaggttgccgaataccgcaaggagcaccagatgactgtcaagggcgag
aacatacccaagcccgtcacaaccttcgacgaggctggcttcccatcctacgtgatgaac
gaggtcaaggctcagggtttcgcaaagcccactgctattcaggctcagggttggcccatg
gctctctctggtcgcgacgttgtcggtgtcgccgagactggttccggaaagacgctcacc
tactgtcttcctgccatcgtccacatcaacgcgcagcctctgctcgcccctggtgacggt
cctatcgtcctcatcctcgcccccacacgtgagcttgctgtccagattcagcaagagatc
agcaagttcggaaagtcctcgcgcatccgaaacacctgcgtctacggaggtgttcccaag
ggtccccaaatccgtgaccttgcacgcggcgttgaggtctgcatcgccacccctggacgt
ctcatcgacatgcttgaggcgggcaagaccaacctccgccgtgttacctacctggttctc
gacgaggctgaccgcatgcttgacatgggttttgagcctcaaatccgcaagatcattggc
caaattcgtcctgatcgtcaaacttgcatgtggtctgctacatggcccaaggaagtccgc
cagcttgctgccgactaccagaaggactggatccaggtcaacatcggttccatggatctg
tccgccaaccaccgcattcaacagatcgttgaggtctgcaccgagttcgagaagcgtgac
cgcatggctaagcacctcgagaccatcatgagcgacaaagacaacaagattttgattttc
actggcaccaagcgcgttgctgacgagatcacccgattccttcgtcaggacggctggcca
gcgctttctattcacggtgacaagcagcaaaacgagcgtgactgggtcttgaacgaattc
aagacgggcaaaagccccatcatggttgccaccgacgtggcttcccgtggtatcgatgtc
cgcaacattactcacgtgttcaactatgactacccgaacaactcggaggactacgtccac
cgtattggtcgtactggtcgtgctggcgctaacggtactgccatcacgctcttcactaca
gaaaactccaagcaagctcgtgatctcgtccagattctcacagagtccaagcagcagatt
gatcctcgcttgcacgagatggcccgctacggtggcggcggcggcggtggtggtcgctgg
ggaggtggccgcggccgtggcggaggccgtggcggacgtggtggctggaccggaggtaac
agcgatcccgtccgcaacagccgctggtga
DBGET
integrated database retrieval system
