Alternaria dauci: 96081397
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Entry
96081397 CDS
T10615
Symbol
ACET3X_001075
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
adac Alternaria dauci
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adac03019
]
96081397 (ACET3X_001075)
Messenger RNA biogenesis [BR:
adac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
96081397 (ACET3X_001075)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
WD40
Beta-prop_THOC3
ARM_TT21_4th
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR5
Motif
Other DBs
NCBI-GeneID:
96081397
NCBI-ProteinID:
XP_069311317
LinkDB
All DBs
Position
1:join(3430562..3430624,3430678..3435177)
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AA seq
1520 aa
AA seq
DB search
MSKIPAPAVEAGPEVPEVETEHLGFKVLNQGKQGPKKLKVLPQPWPTDNLPPACASLLSV
ASKPGLLAAAGPNTLVITSTDTLRNAFQNKTIADAIEQPDDPRLDDRDIDVVTDYTPDIV
ISTSNLRHVAFSADGDFLVTSDDAEGGLTIYSVADVVSRGKKDADNKLATDSTLRALLPN
PSAEFEQYFAIVLDSGKLEICDVGNGGKRTILEHDVNCAAWSARGKAVVSGSTDGTCAIH
MANGELKGVIPRPPDVDDSYEVTGVTWLKTEEFLAVYSVKDQDQDSLESKKYSVIQSTKG
WRSFTYHSFIFDPLPEAFEAPRRQLPARISSTRLQNWKPDLDDMLIITSSHADSIAILAS
TSSKISPHQENCNELMLVAVDDTKKAQVPRTAYGDDELDSVFIGEALDLSSKEKILRPIP
ALEEINEAPWPLPAYMALTHEGLLSAWWVVWNKSIEAGERYPGLIFNSEATKHPSASTPR
ASTPASKLPIATSTPFSKSIGTPATPGTSGIPAFGGNTANGFSTPTPALMKPTPPGFGTP
GFGTAATSLPAPTFGKPPQPAFGAPSSIGKPSQPAFGAPSSIGKPSQPAFGTPSAIGNPA
KSSFGAPSAMGAASGFGFGAAGGMGNKASPWGTPAQSSESKSNPFSAAAGGSSGFAKFGG
AGGSSSFSSFGSNNSAQTGSGFASLGQGQQQSGFAGLKTEPSFGSTVTVGSGTGSSLPSW
ANTPAQQSSSIFGQPEKSSFNTASFESKASDASDANNDRKRDEATPTPQAPASQGLFGLA
GGFKLGTTFASDGTAKDDPAKPAAPANGSFFGSDFANMLGKTGMKPPATPASEAPPQYVS
TTPASPPKSKSLFPSDTPAKESATPKAAPPAQEPATPVDDAPLPPDFTKAKPSRADDAPL
PPDFINTKLPKSTSDDLPPLAGSPGVEVEAPSSSVDVSPIDNEDEDDRDHDDDDESGEDE
DDQDSFDEDEDEDDVEEEDETYPPNNAPKSQATKSAGFSLQDSMNQSKSFFPPAPTPPTM
KSGATSQSGSNTSLAQPSLFSQPSRPAGNQPSFSGSSLFGQQPAKGPKPSVPAKPSFPPP
ANRAQDLRSPSPAPSSSASRLRREPLVAPGASLSSSMLGSKPPTPQPQVSDLEDEEDERM
RAQLSQPIEPSRNLEEFVAYQNYTGGKSPSKTGHAAQIELIYKDINGMVDALGWNARSIK
SFTQYHLQPRSGHKIDRRILDDVQDEGAHGSWFEEFTLCEIQALRALEDDLERELDAGRV
QDVLFKLTQLARLLHDKAKLMTRLNDIRRQIINRKDPEKAEALRKAPLPKELADGQKALR
NDYAQLLTSLRKAEDAVAVLRSRLASHNAQNGSTKAVPSMEAVKKTVLRLASLAEQKNND
ILVLEAQMRKIGLADSSRPSSSSSRNTGTPRRSRGTDLRRSIADTPYATPPTNRNKMSLS
ELNRRALTPDVEATPTPSKGYGLFYTPEGSPTTGKEIARLSDLVDDNIDSLRQTARTRKQ
VAKGLKNALLDRGIKVTKVN
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattcccgcgccggctgtcgaggctgggcccgaggtgccagaggtcgagacg
gagcatctcggcttcaaagtcctcaaccagggcaaacaaggccccaagaagctcaaggtc
ctcccccagccatggcccaccgacaatctgcctccggcctgcgccagcctgctctccgtc
gcctccaagcccggtctgctcgcggccgctggcccaaacacgctcgtcatcacatccaca
gacaccttgcgcaacgcgttccagaacaagaccatcgccgacgccatcgagcagcccgac
gacccgcgcctcgacgaccgcgatattgacgtagtgaccgactacacacccgacatcgtc
atctccacttccaacctgcgccacgtcgcattctctgccgacggagactttttggtcacg
tccgacgacgccgagggcggtttgaccatctacagtgttgcggatgttgtgagccggggc
aagaaagacgcagacaacaaactggctaccgactcgactcttcgcgcactcctgcccaac
ccctctgctgaatttgagcagtacttcgccatcgtcctcgattccggaaagcttgagata
tgcgacgtgggaaacggcggcaaacggacaattctcgagcacgacgtcaactgcgccgct
tggagcgcgcgcggaaaggcggttgtctctggctccactgacggcacctgcgccatacac
atggccaatggagagctcaagggcgtcattcctcgaccgccggatgtggacgatagctac
gaagtgacgggcgtgacgtggttgaaaactgaagagtttctggctgtctactctgtcaag
gaccaggaccaggacagcctagagtccaagaagtacagtgtcatacaatctaccaaaggc
tggaggtctttcacgtatcactcgttcatctttgatcctcttcccgaggccttcgaagct
ccacgccgccaactccctgcacgcatctcgtccacgcgcctacaaaattggaagcccgat
ctcgacgacatgctcatcatcacttcttcccacgcagattccattgcgatattggcctcg
accagcagcaagatctctccacaccaggagaactgcaacgagctcatgcttgtcgctgtt
gacgacacgaaaaaggctcaggtgccgcgaacagcgtatggagacgacgaactcgacagc
gtcttcattggtgaggcacttgatctgtcaagcaaggagaagatattgcgccccatcccc
gccctggaagagatcaacgaggcgccgtggccattgcctgcatacatggctcttactcac
gaaggccttctttcagcctggtgggtcgtgtggaacaagtctatcgaggccggcgaacgc
tatcctggtctcatcttcaacagcgaagccaccaaacatccgtcagcgtcaaccccaagg
gcttctacgcctgcgtccaaactccccatcgctacctctaccccctttagcaagtccatt
ggaacacccgcgaccccaggaacatcgggcattcccgcgtttggcggcaacactgcaaat
ggcttcagtacaccaacccccgctctgatgaagcctacgcctccaggctttggaacgcct
ggatttggcactgctgctacaagtctacctgctccgaccttcggtaagcccccacaacct
gcattcggcgccccgtcttcaatcggcaagccttctcagcctgcattcggggctccttcg
tcaattggtaagccttctcagccagcctttggaacaccgtctgcaatcggcaatcccgca
aagtcatcctttggagcaccgtccgccatgggtgctgctagtggcttcggtttcggagca
gcgggcggaatgggaaacaaagcatcaccctggggaacacctgcacaatcttccgaatcc
aagtccaaccccttttcggcggctgctggtggttcgtctggatttgccaagtttggaggt
gctggagggtcgagttccttctcgagcttcggaagcaataattctgcgcaaacaggctcg
ggctttgcatcgcttggacaagggcagcagcaatctggctttgcgggtctgaagacggag
ccaagctttggctctactgtgactgttggatccggtactgggtcatcactaccttcctgg
gcaaatacacccgcacagcagagcagctcaatctttggacagccagagaagtcttcgttc
aacacagcctcgttcgagtccaaggcctctgatgccagcgacgcgaacaacgaccgaaag
agggatgaggctacacccaccccacaagccccagcatcgcaaggcctgtttggccttgca
ggtggcttcaagctcggcactacctttgctagcgatggcacggccaaggacgatccagcg
aagcctgcggctcctgccaacggctcattcttcggtagtgactttgccaacatgttagga
aagacgggaatgaagccaccagctaccccggcgagtgaggctcctccgcaatacgtctct
accacgccggcatcgccgccaaagtcgaaatcactattcccaagcgacactcccgcgaaa
gagagcgcgactcccaaagcagcaccgcctgcacaggagcccgccactcctgtggacgac
gcgcctttaccaccagacttcaccaaggctaagccatccagggctgacgatgcgcctcta
cctccagactttatcaacacgaagctaccaaagtcgactagcgatgatttgcctcctctc
gctggcagtcctggtgttgaagtagaagcacccagttcttccgtcgatgtatctcccatt
gacaacgaagacgaggatgaccgtgaccatgacgacgacgacgagagcggagaagacgaa
gacgaccaagactcttttgatgaagatgaagatgaggacgacgtcgaagaagaggatgaa
acatacccgccaaacaacgctccaaagtcgcaggctacgaagtcggctggcttcagcttg
caggacagtatgaaccagtcaaagagcttcttccctcctgcgccgactcctccgaccatg
aaatccggtgccacgtcccagtctggtagcaacacttcactcgcccaaccctccttgttt
tcacaaccctcgagacctgctggtaaccagccgtcattctcaggctcatcgctatttgga
caacaaccagccaagggacctaagccatcggtgcctgccaaaccaagcttcccacctccg
gcgaaccgcgctcaagaccttcgctcgcctagtccggctccttcaagctcagcatctcgt
cttcgaagagaacctctagtcgcaccgggtgcttcgttgagctcatctatgcttggatct
aagccgccgacgccacaaccacaggtctctgatctcgaagatgaggaagatgagcgcatg
cgggcacagctttcgcaaccgattgaacccagccggaatctggaagaatttgttgcatac
caaaactacactggtggcaaatcacctagcaagactggccacgctgctcagatcgagttg
atctacaaggacattaacggcatggtggatgcgctgggctggaacgcgcgatccatcaag
tcattcacacagtatcatctgcagcctcggtctggccacaaaatcgacagacgtattctg
gatgatgtccaagatgaaggagcccatggctcatggttcgaggagttcaccctgtgtgag
atccaagccttacgagctcttgaagatgaccttgagcgagagcttgatgctggacgagta
caagatgtgcttttcaagctcacacagcttgctcgtttgcttcacgacaaagccaagctg
atgactcgtcttaacgatattcgccgccagatcatcaatcgcaaagaccctgagaaggca
gaagcactccgcaaagcgccattgcccaaggagcttgcggacgggcagaaagccctgcgt
aacgattatgctcagttgttgacatcactgcgtaaggctgaagacgctgtcgcagttttg
cgctcacgtctggcttcgcacaacgcccagaacggcagcacaaaggcggtaccatctatg
gaagctgtgaagaaaaccgtcctccgtctggccagcctagctgagcagaagaacaacgat
atcctcgtcctagaggcacagatgcgcaagattggcctcgcagactccagccgtccttcc
tcgtcctcctcacgcaacaccggcacgccccgacgatcacgcggcactgatctccgccgc
agcattgctgacacaccgtacgctacgccgcctaccaaccgtaacaagatgagcttgagc
gagctgaaccgtcgtgctctgaccccagacgttgaggctactcccacacctagcaagggc
tatggtttgttctatacgcccgaaggcagcccgacaacaggcaaagagattgcgcgtcta
agcgacctggttgatgacaacatcgatagcttgcgacagactgcccggaccaggaaacag
gtcgccaagggtctcaagaatgcgctccttgatcgtggaattaaggttaccaaggttaat
tga
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integrated database retrieval system
