KEGG   Alternaria dauci: 96081508
Entry
96081508          CDS       T10615                                 
Symbol
ACET3X_001186
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
adac  Alternaria dauci
Pathway
adac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    96081508 (ACET3X_001186)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adac03019]
    96081508 (ACET3X_001186)
   03041 Spliceosome [BR:adac03041]
    96081508 (ACET3X_001186)
   03032 DNA replication proteins [BR:adac03032]
    96081508 (ACET3X_001186)
Messenger RNA biogenesis [BR:adac03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     96081508 (ACET3X_001186)
Spliceosome [BR:adac03041]
 Complex A
  U1 snRNP components
   Sm proteins
    96081508 (ACET3X_001186)
  U2 snRNP components
    96081508 (ACET3X_001186)
 Complex B
  U1 snRNP components
    96081508 (ACET3X_001186)
  U4/U6.U5 tri-snRNP components
    96081508 (ACET3X_001186)
 Complex C
  U2 snRNP components
    96081508 (ACET3X_001186)
DNA replication proteins [BR:adac03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     96081508 (ACET3X_001186)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 96081508
NCBI-ProteinID: XP_069311428
LinkDB
Position
1:complement(join(3808051..3808194,3808246..3808352,3808405..3808422,3808471..3808486))
AA seq 94 aa
MTGRGGRGGGKVLLPPINFIFKLLQSRATISVWLYENLGMRIEGKLRGFDEFMNLVIDDA
IEVTLAKKDAPEERRKVGQILLKGDNISLIQQLQ
NT seq 285 nt   +upstreamnt  +downstreamnt
atgactggacgtggtggccgcggcggaggaaaggttctccttcccccgatcaacttcatt
ttcaagcttctacagtcacgggcgaccatctcggtatggttgtacgagaacttgggcatg
cgcattgagggaaagcttaggggctttgacgaattcatgaacctcgtaatcgacgacgcc
atcgaggtcacgctcgcgaagaaggacgcgccagaggaaaggcgcaaagtcggccagatc
ctgttgaagggcgacaacatttctctcattcagcagctccaataa

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