Alternaria dauci: 96082059
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Entry
96082059 CDS
T10615
Symbol
ACET3X_001737
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
adac Alternaria dauci
Pathway
adac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
96082059 (ACET3X_001737)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adac03000
]
96082059 (ACET3X_001737)
03021 Transcription machinery [BR:
adac03021
]
96082059 (ACET3X_001737)
Transcription factors [BR:
adac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
96082059 (ACET3X_001737)
Transcription machinery [BR:
adac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
96082059 (ACET3X_001737)
RNA polymerase III system
TFIIIB
96082059 (ACET3X_001737)
RNA polymerase I system
SL1/TIF-1B
96082059 (ACET3X_001737)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
96082059
NCBI-ProteinID:
XP_069311979
LinkDB
All DBs
Position
1:join(5612642..5612695,5612750..5613181,5613233..5613496)
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AA seq
249 aa
AA seq
DB search
MDPNSLTSHPSTAAQAQTFVAPGSLSYPQGANLDLTAPAPEQNTQQVADNANGVATPAAT
PDTQNGQVPSGIVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKT
TALVFASGKMVVTGAKSEDDSRLASRKYARIIQKLGFSAKFTDFKIQNIVGSCDIRFPIR
LEGLASRHHTFSSYEPELFPGLIYRMMKPRIVLLIFVSGKIVLTGAKVREEIYQAFELIY
PVLSDFRKS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaactccttgacttctcacccgtccaccgccgcccaggctcagacgttcgtt
gctcctggatctctctcctacccccagggcgcgaacctcgacctgactgcgcctgcccct
gagcagaacactcagcaggttgccgacaatgcaaacggtgtcgccacgcctgcggctact
cccgatacacagaacggtcaagtgccttctggcatcgtgcctactctccagaacatcgtg
gctaccgtcaacctgtccgctcgccttgacctcaagaccatcgctcttcacgcccgtaac
gctgaatacaaccccaagcgtttcgctgccgttatcatgcgtattcgtgagcccaagaca
acggccctggtctttgcgagtggaaaaatggttgtaaccggtgccaagtctgaagatgac
agccgccttgcttcccgcaaatatgcgcggattatccagaagctcgggttcagcgcaaag
ttcaccgacttcaagatccagaacattgtcggctcctgcgacatccgcttccccattcgt
ctcgaaggtcttgcatctcgccatcacactttctcttcctacgagcctgagctgttccct
ggtctcatctaccgtatgatgaagccgagaattgtcctcttgatcttcgtatctggcaag
atcgtcctcactggtgccaaagttcgtgaggagatctaccaggcctttgagctcatctac
ccagtcttgtcggatttccgcaagtcttga
DBGET
integrated database retrieval system
